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Aliases for RPL28P5 Gene

Aliases for RPL28P5 Gene

  • Ribosomal Protein L28 Pseudogene 5 2 3
  • RPL28_2_1625 3
  • AC012618.1 5

External Ids for RPL28P5 Gene

Previous GeneCards Identifiers for RPL28P5 Gene

  • GC19P012233
  • GC19P012371

Summaries for RPL28P5 Gene

GeneCards Summary for RPL28P5 Gene

RPL28P5 (Ribosomal Protein L28 Pseudogene 5) is a Pseudogene.

Additional gene information for RPL28P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL28P5 Gene

Genomics for RPL28P5 Gene

GeneHancer (GH) Regulatory Elements for RPL28P5 Gene

Promoters and enhancers for RPL28P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I012994 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 19.4 +736.8 736822 4.3 HDGF CLOCK ARID4B SIN3A GLI4 ZNF2 SP3 YY2 GMEB1 SMARCA4 GC19M012993 NFIX ZNF20 RNASEH2A DCAF15 TRMT1 ZNF136 ZNF44 RPL28P5 ZNF799
GH19I013148 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.5 +893.6 893569 10.2 MLX DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 STX10 IER2 ENSG00000267598 CCDC130 ZNF136 ZNF44 TRMT1 ZNF709 ZNF564 ZNF791
GH19I012609 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 10.7 +352.2 352235 4.8 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 IRF4 ZNF490 ZNF791 PIR37932 ZNF136 ZNF44 ZNF20 ZNF700 ZNF799 ZNF442 ZNF844
GH19I013089 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.5 +837.6 837605 17.3 IRF4 E2F8 ZNF143 MEF2D GLIS1 NBN NR2C1 KDM1A WT1 SP7 LYL1 PIR62376 ZNF136 CCDC130 TRMT1 ZNF799 ZNF625 RPS6P25 ZNF564 ZNF442
GH19I011343 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 -914.4 -914380 5 CLOCK FEZF1 DMAP1 YY1 ZNF213 ZNF143 ZNF548 SP3 NFYC MEF2D TMEM205 PIR37751 RAB3D PIR44072 CCDC159 ILF3 ZNF136 KRI1 ZNF627 ZNF844
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL28P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL28P5 Gene

Genomic Locations for RPL28P5 Gene
chr19:12,260,126-12,260,582
(GRCh38/hg38)
Size:
457 bases
Orientation:
Plus strand
chr19:12,370,941-12,371,397
(GRCh37/hg19)

Genomic View for RPL28P5 Gene

Genes around RPL28P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL28P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL28P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL28P5 Gene

Proteins for RPL28P5 Gene

Post-translational modifications for RPL28P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL28P5 Gene

Domains & Families for RPL28P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL28P5 Gene

Function for RPL28P5 Gene

Phenotypes From GWAS Catalog for RPL28P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL28P5 Gene

Localization for RPL28P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL28P5 Gene

Pathways & Interactions for RPL28P5 Gene

SuperPathways for RPL28P5 Gene

No Data Available

Interacting Proteins for RPL28P5 Gene

Gene Ontology (GO) - Biological Process for RPL28P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL28P5 Gene

Drugs & Compounds for RPL28P5 Gene

No Compound Related Data Available

Transcripts for RPL28P5 Gene

mRNA/cDNA for RPL28P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL28P5 Gene

No ASD Table

Relevant External Links for RPL28P5 Gene

GeneLoc Exon Structure for
RPL28P5
ECgene alternative splicing isoforms for
RPL28P5

Expression for RPL28P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL28P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPL28P5 Gene

This gene is overexpressed in Testis (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL28P5 Gene:

RPL28P5
genes like me logo Genes that share expression patterns with RPL28P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL28P5 Gene

Orthologs for RPL28P5 Gene

Evolution for RPL28P5 Gene

ENSEMBL:
Gene Tree for RPL28P5 (if available)
TreeFam:
Gene Tree for RPL28P5 (if available)

No data available for Orthologs for RPL28P5 Gene

Paralogs for RPL28P5 Gene

No data available for Paralogs for RPL28P5 Gene

Variants for RPL28P5 Gene

Additional Variant Information for RPL28P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL28P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL28P5 Gene

Disorders for RPL28P5 Gene

No disorders were found for RPL28P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL28P5 Gene

Publications for RPL28P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL28P5 Gene

Sources for RPL28P5 Gene

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