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Aliases for RPL28P2 Gene

Subcategory (RNA class) for RPL28P2 Gene

antisense

Aliases for RPL28P2 Gene

  • Ribosomal Protein L28 Pseudogene 2 2 3
  • Ribosomal Protein L28 (RPL28) Pseudogene 5
  • RPL28_1_335 3
  • AC073476.1 5

External Ids for RPL28P2 Gene

ORGUL Members for RPL28P2 Gene

Previous GeneCards Identifiers for RPL28P2 Gene

  • GC02U901687
  • GC02M232655

Summaries for RPL28P2 Gene

GeneCards Summary for RPL28P2 Gene

RPL28P2 (Ribosomal Protein L28 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL28P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL28P2 Gene

Genomics for RPL28P2 Gene

GeneHancer (GH) Regulatory Elements for RPL28P2 Gene

Promoters and enhancers for RPL28P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J231785 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 62.9 +3.0 3014 2.7 SP1 ZFX CTCF ELF3 MNT SIX5 ZNF148 NKRF CEBPG RERE COPS7B PDE6D DIS3L2 RPL28P2 GIGYF2 NCL ENSG00000251485 ENSG00000261096 TIGD1 ARMC9
GH02J230863 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 48.2 +920.3 920276 11.3 SP1 ZNF652 ZFX CTCF ZNF148 NKRF POLR2A NFIB AHR ZNF24 ITM2C RPL28P2 NCL ENSG00000261096 COPS7B LINC00471 ENSG00000230385 SPATA3-AS1 SPATA3 PSMD1
GH02J231705 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 38.6 +80.8 80832 7.7 MTA3 ZNF652 ZFX SP1 ELF3 CTCF MNT SIX5 ZNF148 NKRF GC02M231705 PTMA DIS3L2 GIGYF2 RPL28P2 COPS7B ENSG00000251485 ENSG00000224376 RNU2-22P ENSG00000277986
GH02J231197 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 33.4 +590.8 590842 2.6 SP1 ELF3 MNT NKRF POLR2A ZNF687 ZSCAN21 AHR ZNF24 TFE3 ARMC9 RPL28P2 DIS3L2 NCL HTR2B GC02P231267 GC02P231268 GC02P231269
GH02J231056 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 35.1 +731.8 731763 5 ZNF652 SP1 ZFX CC2D1A ELF3 CTCF NKRF POLR2A CEBPG AHR PSMD1 HTR2B RPL28P2 DIS3L2 C2orf72 COPS7B NCL SPATA3-AS1 SPATA3 ENSG00000235419
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL28P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL28P2 Gene

Genomic Locations for RPL28P2 Gene
chr2:231,789,481-231,789,887
(GRCh38/hg38)
Size:
407 bases
Orientation:
Minus strand
chr2:232,654,191-232,654,597
(GRCh37/hg19)
Size:
407 bases
Orientation:
Minus strand

Genomic View for RPL28P2 Gene

Genes around RPL28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL28P2 Gene

Proteins for RPL28P2 Gene

Post-translational modifications for RPL28P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL28P2 Gene

Domains & Families for RPL28P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL28P2 Gene

Function for RPL28P2 Gene

Phenotypes From GWAS Catalog for RPL28P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL28P2 Gene

Localization for RPL28P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL28P2 Gene

Pathways & Interactions for RPL28P2 Gene

PathCards logo

SuperPathways for RPL28P2 Gene

No Data Available

Interacting Proteins for RPL28P2 Gene

Gene Ontology (GO) - Biological Process for RPL28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL28P2 Gene

Drugs & Compounds for RPL28P2 Gene

No Compound Related Data Available

Transcripts for RPL28P2 Gene

mRNA/cDNA for RPL28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL28P2 Gene

No ASD Table

Relevant External Links for RPL28P2 Gene

GeneLoc Exon Structure for
RPL28P2
ECgene alternative splicing isoforms for
RPL28P2

Expression for RPL28P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL28P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL28P2 Gene:

RPL28P2
genes like me logo Genes that share expression patterns with RPL28P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL28P2 Gene

Orthologs for RPL28P2 Gene

Evolution for RPL28P2 Gene

ENSEMBL:
Gene Tree for RPL28P2 (if available)
TreeFam:
Gene Tree for RPL28P2 (if available)

No data available for Orthologs for RPL28P2 Gene

Paralogs for RPL28P2 Gene

No data available for Paralogs for RPL28P2 Gene

Variants for RPL28P2 Gene

Additional Variant Information for RPL28P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL28P2 Gene

Disorders for RPL28P2 Gene

No disorders were found for RPL28P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL28P2 Gene

Publications for RPL28P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

No data available for External Links for RPL28P2 Gene

Products for RPL28P2 Gene

Sources for RPL28P2 Gene

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