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RPL27P6 Gene(Pseudogene)

Ribosomal Protein L27 Pseudogene 6

GCID:
GC02P063685
GIFtS:
8
Genes Participants
UDN Logo

Aliases for RPL27P6 Gene

Aliases for RPL27P6 Gene

  • Ribosomal Protein L27 Pseudogene 6 2 3
  • RPL27_2_233 3
  • AC096664.2 5

External Ids for RPL27P6 Gene

Previous GeneCards Identifiers for RPL27P6 Gene

  • GC02P063765
  • GC02P063912

Summaries for RPL27P6 Gene

GeneCards Summary for RPL27P6 Gene

RPL27P6 (Ribosomal Protein L27 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL27P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL27P6 Gene

Genomics for RPL27P6 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL27P6 Gene

Promoters and enhancers for RPL27P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02I063665 Enhancer 0.4 ENCODE 0.4 -18.1 -18137 1.4 ATF7 ATF2 MDH1 RPL27P6 RPS4XP5 WDPCP
GH02I063662 Enhancer 0.3 ENCODE 0.3 -21.6 -21649 0.5 GABPA MDH1 RPS4XP5 RPL27P6 WDPCP
GH02I063661 Enhancer 0.2 ENCODE 0.3 -22.8 -22777 0.9 RPS4XP5 RPL27P6 WDPCP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL27P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL27P6 Gene

Genomic Locations for RPL27P6 Gene
chr2:63,684,271-63,684,746
(GRCh38/hg38)
Size:
476 bases
Orientation:
Plus strand
chr2:63,911,405-63,911,880
(GRCh37/hg19)

Genomic View for RPL27P6 Gene

Genes around RPL27P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27P6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL27P6 Gene

Proteins for RPL27P6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL27P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27P6 Gene

Domains & Families for RPL27P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL27P6 Gene

Function for RPL27P6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27P6 Gene

Localization for RPL27P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27P6 Gene

Pathways & Interactions for RPL27P6 Gene

SuperPathways for RPL27P6 Gene

PathCards logo More details on SuperPathways for RPL27P6
No Data Available

Interacting Proteins for RPL27P6 Gene

Gene Ontology (GO) - Biological Process for RPL27P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL27P6 Gene

Drugs & Compounds for RPL27P6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL27P6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL27P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27P6 Gene

No ASD Table

Relevant External Links for RPL27P6 Gene

GeneLoc Exon Structure for
RPL27P6
ECgene alternative splicing isoforms for
RPL27P6

Expression for RPL27P6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL27P6 Gene

mRNA expression in normal human tissues for RPL27P6 Gene
mRNA expression by GTEx for RPL27P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL27P6 Gene:

RPL27P6
genes like me logo Genes that share expression patterns with RPL27P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27P6 Gene

Orthologs for RPL27P6 Gene

Evolution for RPL27P6 Gene

ENSEMBL:
Gene Tree for RPL27P6 (if available)
TreeFam:
Gene Tree for RPL27P6 (if available)

No data available for Orthologs for RPL27P6 Gene

Paralogs for RPL27P6 Gene

No data available for Paralogs for RPL27P6 Gene

Variants for RPL27P6 Gene

Additional Variant Information for RPL27P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27P6 Gene

Disorders for RPL27P6 Gene

No disorders were found for RPL27P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27P6 Gene

Publications for RPL27P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL27P6 Gene

Sources for RPL27P6 Gene

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