Aliases for RPL27AP8 Gene

Aliases for RPL27AP8 Gene

  • Ribosomal Protein L27a Pseudogene 8 2 3 5
  • RPL27A_5_1310 3

External Ids for RPL27AP8 Gene

Previous GeneCards Identifiers for RPL27AP8 Gene

  • GC13U900620
  • GC13M048341

Summaries for RPL27AP8 Gene

GeneCards Summary for RPL27AP8 Gene

RPL27AP8 (Ribosomal Protein L27a Pseudogene 8) is a Pseudogene.

Additional gene information for RPL27AP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL27AP8 Gene

Genomics for RPL27AP8 Gene

GeneHancer (GH) Regulatory Elements for RPL27AP8 Gene

Promoters and enhancers for RPL27AP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J047774 Enhancer 0.8 Ensembl ENCODE 0.4 -7.1 -7105 0.8 EP300 CTCF JUND REST RAD21 TRIM22 SMC3 BDP1 CEBPB PBX2 MED4 HTR2A LINC00562 RPL27AP8 piR-46002-150 SUCLA2
GH13J047773 Enhancer 0.2 Ensembl 0.4 -6.2 -6205 0.6 HTR2A RPL27AP8 piR-46002-150 SUCLA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL27AP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL27AP8 Gene

Genomic Locations for RPL27AP8 Gene
chr13:47,766,640-47,767,096
(GRCh38/hg38)
Size:
457 bases
Orientation:
Minus strand
chr13:48,340,775-48,341,231
(GRCh37/hg19)
Size:
457 bases
Orientation:
Minus strand

Genomic View for RPL27AP8 Gene

Genes around RPL27AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP8 Gene

Proteins for RPL27AP8 Gene

Post-translational modifications for RPL27AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP8 Gene

Domains & Families for RPL27AP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL27AP8 Gene

Function for RPL27AP8 Gene

Phenotypes From GWAS Catalog for RPL27AP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP8 Gene

Localization for RPL27AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27AP8 Gene

Pathways & Interactions for RPL27AP8 Gene

PathCards logo

SuperPathways for RPL27AP8 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL27AP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL27AP8 Gene

Drugs & Compounds for RPL27AP8 Gene

No Compound Related Data Available

Transcripts for RPL27AP8 Gene

mRNA/cDNA for RPL27AP8 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP8 Gene

No ASD Table

Relevant External Links for RPL27AP8 Gene

GeneLoc Exon Structure for
RPL27AP8

Expression for RPL27AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL27AP8 Gene

genes like me logo Genes that share expression patterns with RPL27AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP8 Gene

Orthologs for RPL27AP8 Gene

Evolution for RPL27AP8 Gene

ENSEMBL:
Gene Tree for RPL27AP8 (if available)
TreeFam:
Gene Tree for RPL27AP8 (if available)

No data available for Orthologs for RPL27AP8 Gene

Paralogs for RPL27AP8 Gene

No data available for Paralogs for RPL27AP8 Gene

Variants for RPL27AP8 Gene

Additional Variant Information for RPL27AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP8 Gene

Disorders for RPL27AP8 Gene

Additional Disease Information for RPL27AP8

Genetic Association Database
(GAD)

No disorders were found for RPL27AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL27AP8 Gene

Publications for RPL27AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Genome-wide diet-gene interaction analyses for risk of colorectal cancer. (PMID: 24743840) Figueiredo JC … GECCO (PLoS genetics 2014) 3 54
  3. A genome-wide association study of aging. (PMID: 21782286) Walter S … Franceschini N (Neurobiology of aging 2011) 41 54
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41 54

Products for RPL27AP8 Gene

Sources for RPL27AP8 Gene