Aliases for RPL27AP5 Gene

Aliases for RPL27AP5 Gene

  • Ribosomal Protein L27a Pseudogene 5 2 3 5
  • RPL27A_2_577 3

External Ids for RPL27AP5 Gene

Previous GeneCards Identifiers for RPL27AP5 Gene

  • GC05U901063
  • GC05M074286

Summaries for RPL27AP5 Gene

GeneCards Summary for RPL27AP5 Gene

RPL27AP5 (Ribosomal Protein L27a Pseudogene 5) is a Pseudogene.

Additional gene information for RPL27AP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL27AP5 Gene

Genomics for RPL27AP5 Gene

GeneHancer (GH) Regulatory Elements for RPL27AP5 Gene

Promoters and enhancers for RPL27AP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J074993 Enhancer 0.4 Ensembl 0.7 -3.1 -3064 0.6 SRF NFIL3 HLF NFYC CEBPB POC5 RPL27AP5 lnc-GCNT4-4 lnc-NSA2-8 ENSG00000249157 lnc-GCNT4-3 ENSG00000249856 RF00017-4726
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL27AP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL27AP5 Gene

Genomic Locations for RPL27AP5 Gene
chr5:74,990,189-74,990,637
(GRCh38/hg38)
Size:
449 bases
Orientation:
Minus strand
chr5:74,286,014-74,286,462
(GRCh37/hg19)
Size:
449 bases
Orientation:
Minus strand

Genomic View for RPL27AP5 Gene

Genes around RPL27AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP5 Gene

Proteins for RPL27AP5 Gene

Post-translational modifications for RPL27AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP5 Gene

Domains & Families for RPL27AP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL27AP5 Gene

Function for RPL27AP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP5 Gene

Localization for RPL27AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27AP5 Gene

Pathways & Interactions for RPL27AP5 Gene

PathCards logo

SuperPathways for RPL27AP5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL27AP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL27AP5 Gene

Drugs & Compounds for RPL27AP5 Gene

No Compound Related Data Available

Transcripts for RPL27AP5 Gene

mRNA/cDNA for RPL27AP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP5 Gene

No ASD Table

Relevant External Links for RPL27AP5 Gene

GeneLoc Exon Structure for
RPL27AP5

Expression for RPL27AP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL27AP5 Gene

genes like me logo Genes that share expression patterns with RPL27AP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP5 Gene

Orthologs for RPL27AP5 Gene

Evolution for RPL27AP5 Gene

ENSEMBL:
Gene Tree for RPL27AP5 (if available)
TreeFam:
Gene Tree for RPL27AP5 (if available)

No data available for Orthologs for RPL27AP5 Gene

Paralogs for RPL27AP5 Gene

No data available for Paralogs for RPL27AP5 Gene

Variants for RPL27AP5 Gene

Additional Variant Information for RPL27AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP5 Gene

Disorders for RPL27AP5 Gene

No disorders were found for RPL27AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP5 Gene

Publications for RPL27AP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL27AP5 Gene

Sources for RPL27AP5 Gene