Aliases for RPL27AP Gene

Aliases for RPL27AP Gene

  • Ribosomal Protein L27a Pseudogene 2 3 5
  • DJ1028D15.2 2 3
  • RPL27AP 5

External Ids for RPL27AP Gene

Previous GeneCards Identifiers for RPL27AP Gene

  • GC20U990082
  • GC20P041969
  • GC20P042919
  • GC20P042966
  • GC20P041714
  • GC20P042282
  • GC20P039016

Summaries for RPL27AP Gene

GeneCards Summary for RPL27AP Gene

RPL27AP (Ribosomal Protein L27a Pseudogene) is a Pseudogene.

Additional gene information for RPL27AP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL27AP Gene

Genomics for RPL27AP Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL27AP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J043652 Enhancer 0.9 ENCODE 600.7 +0.5 545 0.9 GATAD2A TFE3 SOX13 NFKBIZ RCOR2 RXRB IRF2 SP1 CEBPA ETS1 RPL27AP lnc-IFT52-1-002 MYBL2 IFT52 SGK2 lnc-GTSF1L-10 lnc-IFT52-1-001
GH20J043653 Enhancer 0.3 ENCODE 600.7 +1.6 1610 0.5 SCRT2 ZMYM3 RPL27AP lnc-IFT52-1-002 IFT52 SGK2 lnc-GTSF1L-10 lnc-IFT52-1-001 MYBL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL27AP on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL27AP Gene

Genomic Locations for RPL27AP Gene
chr20:43,652,504-43,653,332
(GRCh38/hg38)
Size:
829 bases
Orientation:
Plus strand
chr20:42,281,148-42,281,980
(GRCh37/hg19)
Size:
833 bases
Orientation:
Plus strand

Genomic View for RPL27AP Gene

Genes around RPL27AP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL27AP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL27AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL27AP Gene

Proteins for RPL27AP Gene

Post-translational modifications for RPL27AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL27AP Gene

Domains & Families for RPL27AP Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL27AP Gene

Function for RPL27AP Gene

Phenotypes From GWAS Catalog for RPL27AP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL27AP Gene

Localization for RPL27AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL27AP Gene

Pathways & Interactions for RPL27AP Gene

PathCards logo

SuperPathways for RPL27AP Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL27AP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL27AP Gene

Drugs & Compounds for RPL27AP Gene

No Compound Related Data Available

Transcripts for RPL27AP Gene

mRNA/cDNA for RPL27AP Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL27AP Gene

No ASD Table

Relevant External Links for RPL27AP Gene

GeneLoc Exon Structure for
RPL27AP

Expression for RPL27AP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL27AP Gene

mRNA differential expression in normal tissues according to GTEx for RPL27AP Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x14.4) and Brain - Cerebellum (x11.0).
genes like me logo Genes that share expression patterns with RPL27AP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL27AP Gene

Orthologs for RPL27AP Gene

Evolution for RPL27AP Gene

ENSEMBL:
Gene Tree for RPL27AP (if available)
TreeFam:
Gene Tree for RPL27AP (if available)

No data available for Orthologs for RPL27AP Gene

Paralogs for RPL27AP Gene

No data available for Paralogs for RPL27AP Gene

Variants for RPL27AP Gene

Additional Variant Information for RPL27AP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL27AP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL27AP Gene

Disorders for RPL27AP Gene

No disorders were found for RPL27AP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL27AP Gene

Publications for RPL27AP Gene

No publications were found for RPL27AP Gene.

Products for RPL27AP Gene

Sources for RPL27AP Gene