Aliases for RPL26P30 Gene

Aliases for RPL26P30 Gene

  • Ribosomal Protein L26 Pseudogene 30 2 3 5
  • RPL26_10_1113 3

External Ids for RPL26P30 Gene

Previous GeneCards Identifiers for RPL26P30 Gene

  • GC11M002315
  • GC11M002357

Summaries for RPL26P30 Gene

GeneCards Summary for RPL26P30 Gene

RPL26P30 (Ribosomal Protein L26 Pseudogene 30) is a Pseudogene.

Additional gene information for RPL26P30 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL26P30 Gene

Genomics for RPL26P30 Gene

GeneHancer (GH) Regulatory Elements for RPL26P30 Gene

Promoters and enhancers for RPL26P30 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J001770 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +575.7 575737 3.8 ZNF217 TCF12 USF1 JUND FOS ZIC2 CLOCK AFF1 TARDBP DNMT1 ENSG00000287484 lnc-CTSD-1 IFITM10 TNNI2 TSPAN4 SNORA52 PIDD1 ENSG00000255142 SYT8 KRTAP5-6
GH11J001771 Enhancer 0.7 ENCODE dbSUPER 10.7 +577.8 577795 0.1 ZNF623 ZNF426 ZFP64 ZC3H11A ZNF433 ZNF555 PRDM12 ZNF697 ZNF577 GLI2 SYT8 TNNI2 KRTAP5-6 LINC02708 RPL26P30 lnc-CTSD-1 CTSD
GH11J001769 Enhancer 0.7 ENCODE 10.7 +578.1 578119 0.2 ZNF623 CUX1 NFIC ZNF426 ZNF318 FOSL2 ZFP64 NFIB NCOA3 MAFK SYT8 TNNI2 KRTAP5-6 LINC02708 RPL26P30 CTSD lnc-CTSD-1
GH11J002365 Enhancer 0.6 Ensembl dbSUPER 0.4 -19.3 -19316 2.8 RXRA HNF4A HLF CTCF CTCFL SP1 ENSG00000199550 CD81-AS1 RPL26P30
GH11J002369 Enhancer 0.6 dbSUPER 0.4 -22.2 -22191 1.1 NR2F2 JUND RAD21 RXRA HNF4A REST MAX YY1 SP1 ZNF770 ENSG00000199550 CD81-AS1 RPL26P30
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL26P30 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL26P30 Gene

Genomic Locations for RPL26P30 Gene
chr11:2,335,135-2,347,685
(GRCh38/hg38)
Size:
12,551 bases
Orientation:
Minus strand
chr11:2,356,362-2,357,006
(GRCh37/hg19)
Size:
645 bases
Orientation:
Minus strand

Genomic View for RPL26P30 Gene

Genes around RPL26P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL26P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL26P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL26P30 Gene

Proteins for RPL26P30 Gene

Post-translational modifications for RPL26P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL26P30 Gene

Domains & Families for RPL26P30 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL26P30 Gene

Function for RPL26P30 Gene

Phenotypes From GWAS Catalog for RPL26P30 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL26P30 Gene

Localization for RPL26P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL26P30 Gene

Pathways & Interactions for RPL26P30 Gene

PathCards logo

SuperPathways for RPL26P30 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL26P30 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL26P30 Gene

Drugs & Compounds for RPL26P30 Gene

No Compound Related Data Available

Transcripts for RPL26P30 Gene

mRNA/cDNA for RPL26P30 Gene

1 REFSEQ mRNAs :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL26P30 Gene

No ASD Table

Relevant External Links for RPL26P30 Gene

GeneLoc Exon Structure for
RPL26P30

Expression for RPL26P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL26P30 Gene

genes like me logo Genes that share expression patterns with RPL26P30: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL26P30 Gene

Orthologs for RPL26P30 Gene

Evolution for RPL26P30 Gene

ENSEMBL:
Gene Tree for RPL26P30 (if available)
TreeFam:
Gene Tree for RPL26P30 (if available)

No data available for Orthologs for RPL26P30 Gene

Paralogs for RPL26P30 Gene

No data available for Paralogs for RPL26P30 Gene

Variants for RPL26P30 Gene

Additional Variant Information for RPL26P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL26P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL26P30 Gene

Disorders for RPL26P30 Gene

No disorders were found for RPL26P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL26P30 Gene

Publications for RPL26P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Human POGZ modulates dissociation of HP1alpha from mitotic chromosome arms through Aurora B activation. (PMID: 20562864) Nozawa RS … Obuse C (Nature cell biology 2010) 3 54
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

No data available for Mastermind for RPL26P30 Gene

Products for RPL26P30 Gene

Sources for RPL26P30 Gene