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Aliases for RPL24 Gene

Aliases for RPL24 Gene

  • Ribosomal Protein L24 2 3 5
  • Large Ribosomal Subunit Protein EL24 3 4
  • 60S Ribosomal Protein L30 3 4
  • Epididymis Secretory Protein Li 310 3
  • 60S Ribosomal Protein L24 3
  • Ribosomal Protein L30 3
  • HEL-S-310 3
  • L24 3

External Ids for RPL24 Gene

Previous GeneCards Identifiers for RPL24 Gene

  • GC03M098065
  • GC03M100829
  • GC03M102677
  • GC03M102720
  • GC03M102882
  • GC03M101399
  • GC03M098769

Summaries for RPL24 Gene

Entrez Gene Summary for RPL24 Gene

  • Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L24E family of ribosomal proteins. It is located in the cytoplasm. This gene has been referred to as ribosomal protein L30 because the encoded protein shares amino acid identity with the L30 ribosomal proteins from S. cerevisiae; however, its official name is ribosomal protein L24. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

GeneCards Summary for RPL24 Gene

RPL24 (Ribosomal Protein L24) is a Protein Coding gene. Diseases associated with RPL24 include Bone Resorption Disease and Bone Remodeling Disease. Among its related pathways are Viral mRNA Translation and Influenza Viral RNA Transcription and Replication. Gene Ontology (GO) annotations related to this gene include structural constituent of ribosome.

Gene Wiki entry for RPL24 Gene

Additional gene information for RPL24 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL24 Gene

Genomics for RPL24 Gene

GeneHancer (GH) Regulatory Elements for RPL24 Gene

Promoters and enhancers for RPL24 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I101683 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 574.4 +1.0 978 5.2 PKNOX1 SMAD1 ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 YY1 RPL24 GC03P101686 LOC105374013 ZBTB11-AS1 SENP7 RPS18P5 ZNF90P1 ZBTB11 TFG PDCL3P4
GH03I101643 Enhancer 1.3 Ensembl ENCODE dbSUPER 23 +42.6 42631 1.8 ATF1 ZBTB40 ZNF766 CAVIN1 ZBTB2 ZBTB11 USF2 ZEB2 HDAC8 ZNF592 ZBTB11-AS1 RPL24 NXPE3 SENP7 TFG PDCL3P4 GC03P101648 PIR36650
GH03I101778 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 10.9 -93.2 -93244 3.4 HDGF PKNOX1 ATF1 ARID4B SIN3A ZBTB7B ZNF48 GLIS2 ZNF207 ZNF143 NXPE3 CEP97 RPL24 SENP7 ENSG00000249474
GH03I101845 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 9.2 -168.3 -168319 19.2 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B SIN3A IRF4 YY1 NFKBIZ RPS18P5 RPL24 ZBTB11-AS1 PDCL3P4 SENP7 GC03P101863 GC03P101864 GC03P101828
GH03I101560 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.1 +124.7 124720 2.3 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 SLC30A9 TRMT10C SENP7 NXPE3 RPL24 ZBTB11-AS1 IMPG2 PDCL3P4 PCNP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL24 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the RPL24 gene promoter:

Genomic Locations for RPL24 Gene

Genomic Locations for RPL24 Gene
chr3:101,681,090-101,686,782
(GRCh38/hg38)
Size:
5,693 bases
Orientation:
Minus strand
chr3:101,399,934-101,405,626
(GRCh37/hg19)

Genomic View for RPL24 Gene

Genes around RPL24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL24 Gene

Proteins for RPL24 Gene

  • Protein details for RPL24 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P83731-RL24_HUMAN
    Recommended name:
    60S ribosomal protein L24
    Protein Accession:
    P83731
    Secondary Accessions:
    • B2R4Y3
    • P38663
    • Q6IBS3

    Protein attributes for RPL24 Gene

    Size:
    157 amino acids
    Molecular mass:
    17779 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RPL24 Gene

neXtProt entry for RPL24 Gene

Post-translational modifications for RPL24 Gene

  • Ubiquitination at isoforms=2, isoforms=12, isoforms=35, Lys43, Lys131, and Lys147

Other Protein References for RPL24 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RPL24 Gene

Domains & Families for RPL24 Gene

Gene Families for RPL24 Gene

HGNC:
Human Protein Atlas (HPA):
  • Plasma proteins
  • Predicted intracellular proteins
  • Ribosomal proteins

Protein Domains for RPL24 Gene

Suggested Antigen Peptide Sequences for RPL24 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P83731

UniProtKB/Swiss-Prot:

RL24_HUMAN :
  • Belongs to the eukaryotic ribosomal protein eL24 family.
Family:
  • Belongs to the eukaryotic ribosomal protein eL24 family.
genes like me logo Genes that share domains with RPL24: view

Function for RPL24 Gene

Molecular function for RPL24 Gene

GENATLAS Biochemistry:
60S ribosomal protein L24

Phenotypes From GWAS Catalog for RPL24 Gene

Gene Ontology (GO) - Molecular Function for RPL24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IBA,TAS --
GO:0003735 structural constituent of ribosome NAS,TAS 12962325
GO:0005515 protein binding IPI 24965446
GO:0045296 cadherin binding IDA 25468996
genes like me logo Genes that share ontologies with RPL24: view
genes like me logo Genes that share phenotypes with RPL24: view

miRNA for RPL24 Gene

miRTarBase miRNAs that target RPL24

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RPL24 Gene

Localization for RPL24 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RPL24 gene
Compartment Confidence
extracellular 5
cytosol 5
mitochondrion 1
endoplasmic reticulum 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Endoplasmic reticulum (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for RPL24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA 25468996
GO:0005783 endoplasmic reticulum IDA --
GO:0005829 cytosol TAS --
GO:0005840 ribosome IEA --
GO:0016020 membrane HDA,IDA 19946888
genes like me logo Genes that share ontologies with RPL24: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RPL24 Gene

Pathways & Interactions for RPL24 Gene

genes like me logo Genes that share pathways with RPL24: view

Pathways by source for RPL24 Gene

1 KEGG pathway for RPL24 Gene
1 GeneGo (Thomson Reuters) pathway for RPL24 Gene

Gene Ontology (GO) - Biological Process for RPL24 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000027 ribosomal large subunit assembly IBA --
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS --
GO:0006364 rRNA processing TAS --
GO:0006412 translation IBA,NAS 12962325
GO:0006413 translational initiation TAS --
genes like me logo Genes that share ontologies with RPL24: view

No data available for SIGNOR curated interactions for RPL24 Gene

Drugs & Compounds for RPL24 Gene

No Compound Related Data Available

Transcripts for RPL24 Gene

Unigene Clusters for RPL24 Gene

Ribosomal protein L24:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL24 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5a · 5b
SP1: - -
SP2: -
SP3: - -
SP4:

Relevant External Links for RPL24 Gene

GeneLoc Exon Structure for
RPL24
ECgene alternative splicing isoforms for
RPL24

Expression for RPL24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL24 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for RPL24 Gene

This gene is overexpressed in Tlymphocyte (13.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for RPL24 Gene



Protein tissue co-expression partners for RPL24 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL24 Gene:

RPL24

SOURCE GeneReport for Unigene cluster for RPL24 Gene:

Hs.477028

Evidence on tissue expression from TISSUES for RPL24 Gene

  • Liver(4.6)
  • Intestine(4.5)
  • Nervous system(4.1)
  • Lung(3.9)
  • Bone(3.7)
  • Muscle(3.6)
  • Pancreas(3.6)
  • Blood(2.8)
  • Thyroid gland(2.8)
  • Eye(2.7)
  • Heart(2.7)
  • Skin(2.7)
  • Kidney(2.6)
  • Stomach(2.6)
  • Spleen(2.4)
  • Lymph node(2.2)
  • Adrenal gland(2)
genes like me logo Genes that share expression patterns with RPL24: view

No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL24 Gene

Orthologs for RPL24 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for RPL24 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RPL24 33
  • 100 (n)
-- 34
  • 100 (a)
OneToMany
mouse
(Mus musculus)
Mammalia RPL24 34
  • 100 (a)
OneToOne
Rpl24 33 16
  • 91.51 (n)
oppossum
(Monodelphis domestica)
Mammalia RPL24 34
  • 97 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RPL24 34
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RPL24 33 34
  • 94.48 (n)
dog
(Canis familiaris)
Mammalia RPL24 33 34
  • 94.27 (n)
rat
(Rattus norvegicus)
Mammalia Rpl24 33
  • 90.66 (n)
chicken
(Gallus gallus)
Aves RPL24 33 34
  • 80.04 (n)
lizard
(Anolis carolinensis)
Reptilia RPL24 34
  • 92 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia rpl24 33
  • 76.56 (n)
Str.1374 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.24759 33
zebrafish
(Danio rerio)
Actinopterygii rpl24 34 33
  • 74.31 (n)
OneToOne
-- 33
fruit fly
(Drosophila melanogaster)
Insecta CG9282 35
  • 70 (a)
RpL24 34 33
  • 57.63 (n)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010216 33
  • 59.48 (n)
worm
(Caenorhabditis elegans)
Secernentea rpl-24.1 35 33 34
  • 52.78 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E10869g 33
  • 56.39 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RPL24A 34 33
  • 56.36 (n)
OneToMany
RPL24B 34
  • 50 (a)
OneToMany
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_AFR477C 33
  • 55.45 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons STV1 33
  • 57.8 (n)
rice
(Oryza sativa)
Liliopsida Os05g0486700 33
  • 55.76 (n)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4973 34
  • 64 (a)
OneToOne
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes rpl2402 33
  • 56.97 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU03150 33
  • 56.06 (n)
Species where no ortholog for RPL24 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RPL24 Gene

ENSEMBL:
Gene Tree for RPL24 (if available)
TreeFam:
Gene Tree for RPL24 (if available)

Paralogs for RPL24 Gene

(1) SIMAP similar genes for RPL24 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with RPL24: view

No data available for Paralogs for RPL24 Gene

Variants for RPL24 Gene

Sequence variations from dbSNP and Humsavar for RPL24 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000445823 -- 101,687,982(-) T/G upstream_transcript_variant
rs1000733750 -- 101,688,259(-) A/G upstream_transcript_variant
rs1000814459 -- 101,687,786(-) T/C upstream_transcript_variant
rs1001099590 -- 101,688,178(-) T/C upstream_transcript_variant
rs1001270862 -- 101,684,134(-) C/T intron_variant

Variation tolerance for RPL24 Gene

Residual Variation Intolerance Score: 38.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.11; 2.41% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for RPL24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RPL24 Gene

Disorders for RPL24 Gene

MalaCards: The human disease database

(3) MalaCards diseases for RPL24 Gene - From: DISEASES

Disorder Aliases PubMed IDs
bone resorption disease
  • bone resorption
bone remodeling disease
cauda equina neoplasm
  • tumor of the cauda equina
- elite association - COSMIC cancer census association via MalaCards
Search RPL24 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for RPL24

genes like me logo Genes that share disorders with RPL24: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RPL24 Gene

Publications for RPL24 Gene

  1. A map of 75 human ribosomal protein genes. (PMID: 9582194) Kenmochi N … Page DC (Genome research 1998) 2 3 4 58
  2. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen JV … Mann M (Cell 2006) 3 4 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  4. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. (PMID: 11875025) Yoshihama M … Kenmochi N (Genome research 2002) 3 4 58
  5. Characterization of cDNA clones encoding the human homologue of Saccharomyces cerevisiae ribosomal protein L30. (PMID: 8428672) Johnson KR (Gene 1993) 3 4 58

Products for RPL24 Gene

Sources for RPL24 Gene

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