Aliases for RPL23P3 Gene

Aliases for RPL23P3 Gene

  • Ribosomal Protein L23 Pseudogene 3 2 3
  • Ribosomal Protein L23 (RPL23) Pseudogene 5
  • RPL23_1_65 3
  • AC104837.2 5

External Ids for RPL23P3 Gene

Previous GeneCards Identifiers for RPL23P3 Gene

  • GC01P078906
  • GC01P079132

Summaries for RPL23P3 Gene

GeneCards Summary for RPL23P3 Gene

RPL23P3 (Ribosomal Protein L23 Pseudogene 3) is a Pseudogene.

Additional gene information for RPL23P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23P3 Gene

Genomics for RPL23P3 Gene

GeneHancer (GH) Regulatory Elements for RPL23P3 Gene

Promoters and enhancers for RPL23P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J079322 Enhancer 0.9 Ensembl ENCODE 4.1 +657.1 657076 1.9 TCF12 JUND FOS CLOCK TRIM28 RFX1 EP300 ZEB1 CTBP1 WT1 ENSG00000235011 ENSG00000282898 LINC02792 LOC105378811 lnc-ADGRL4-4 RPL23P3 lnc-IFI44-2 LOC105378810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23P3 Gene

Genomic Locations for RPL23P3 Gene
chr1:78,666,271-78,666,697
(GRCh38/hg38)
Size:
427 bases
Orientation:
Plus strand
chr1:79,131,956-79,132,382
(GRCh37/hg19)
Size:
427 bases
Orientation:
Plus strand

Genomic View for RPL23P3 Gene

Genes around RPL23P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23P3 Gene

Proteins for RPL23P3 Gene

Post-translational modifications for RPL23P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23P3 Gene

Domains & Families for RPL23P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23P3 Gene

Function for RPL23P3 Gene

Phenotypes From GWAS Catalog for RPL23P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P3 Gene

Localization for RPL23P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23P3 Gene

Pathways & Interactions for RPL23P3 Gene

PathCards logo

SuperPathways for RPL23P3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL23P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23P3 Gene

Drugs & Compounds for RPL23P3 Gene

No Compound Related Data Available

Transcripts for RPL23P3 Gene

mRNA/cDNA for RPL23P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23P3 Gene

No ASD Table

Relevant External Links for RPL23P3 Gene

GeneLoc Exon Structure for
RPL23P3

Expression for RPL23P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23P3 Gene

genes like me logo Genes that share expression patterns with RPL23P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P3 Gene

Orthologs for RPL23P3 Gene

Evolution for RPL23P3 Gene

ENSEMBL:
Gene Tree for RPL23P3 (if available)
TreeFam:
Gene Tree for RPL23P3 (if available)

No data available for Orthologs for RPL23P3 Gene

Paralogs for RPL23P3 Gene

No data available for Paralogs for RPL23P3 Gene

Variants for RPL23P3 Gene

Additional Variant Information for RPL23P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P3 Gene

Disorders for RPL23P3 Gene

Additional Disease Information for RPL23P3

Genetic Association Database
(GAD)

No disorders were found for RPL23P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P3 Gene

Publications for RPL23P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Genome-wide association study meta-analysis of European and Asian-ancestry samples identifies three novel loci associated with bipolar disorder. (PMID: 22182935) Chen DT … Strauss J (Molecular psychiatry 2013) 41 54
  3. Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (PMID: 21926972) Psychiatric GWAS Consortium Bipolar Disorder Working Group (Nature genetics 2011) 41 54
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41 54
  5. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 41 54

No data available for Mastermind for RPL23P3 Gene

Products for RPL23P3 Gene

Sources for RPL23P3 Gene