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Aliases for RPL23P11 Gene
External Ids for RPL23P11 Gene
- HGNC: 36457
- Entrez Gene: 100271297
- Ensembl: ENSG00000226407
Previous GeneCards Identifiers for RPL23P11 Gene
- GC10U901136
- GC10P034154
Summaries for RPL23P11 Gene
GeneCards Summary for RPL23P11 Gene
RPL23P11 (Ribosomal Protein L23 Pseudogene 11) is a Pseudogene.
Additional gene information for RPL23P11 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23P11 Gene
Genomics for RPL23P11 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL23P11 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J033875 | Enhancer | 1 | Ensembl ENCODE | 0.4 | +12.6 | 12572 | 1.8 | GATAD2A RCOR2 RXRB SP1 GABPA CEBPA SOX13 CEBPB ETS1 EZH2 | NRP1 HSALNG0077221 RPL23P11 lnc-CCDC7-20 PARD3 | |
| GH10J033857 | Enhancer | 0.5 | Ensembl | 0.7 | -3.5 | -3512 | 6 | RFX5 CEBPB NFIC NFIB HNF4A RXRA SP1 PKNOX1 CREB1 | RPL23P11 lnc-CCDC7-20 piR-33605-042 NRP1 PARD3 | |
| GH10J033868 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | +5.5 | 5470 | 2.1 | ATF7 RCOR1 FOXA1 ATF2 GATA2 | RPL23P11 lnc-CCDC7-20 HSALNG0077221 NRP1 PARD3 | |
| GH10J033871 | Enhancer | 0.3 | Ensembl | 0.4 | +7.5 | 7468 | 0.4 | CREB1 | NRP1 HSALNG0077221 RPL23P11 lnc-CCDC7-20 PARD3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL23P11 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL23P11 Gene
Genomic Locations for RPL23P11 Gene
- chr10:33,864,313-33,864,723
- (GRCh38/hg38)
- Size:
- 411 bases
- Orientation:
- Plus strand
- chr10:34,153,241-34,153,651
- (GRCh37/hg19)
- Size:
- 411 bases
- Orientation:
- Plus strand
Genomic View for RPL23P11 Gene
Genes around RPL23P11 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p11.22 by HGNC
- 10p11.22 by Entrez Gene
- 10p11.22 by Ensembl
RPL23P11 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL23P11 Gene
Proteins for RPL23P11 Gene
Post-translational modifications for RPL23P11 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23P11
- Origene Custom Protein Services for RPL23P11
No data available for DME Specific Peptides for RPL23P11 Gene
Domains & Families for RPL23P11 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23P11 Gene
Function for RPL23P11 Gene
Phenotypes From GWAS Catalog for RPL23P11 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL23P11 - Select products 50% OFF >
- * RPL23P11 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL23P11
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23P11 Gene
Localization for RPL23P11 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23P11 Gene
Transcripts for RPL23P11 Gene
mRNA/cDNA for RPL23P11 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000418077 411 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL23P11 - Select products 50% OFF >
- * RPL23P11 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL23P11
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL23P11 Gene
- GeneLoc Exon Structure for
- RPL23P11
Expression for RPL23P11 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23P11 Gene
Orthologs for RPL23P11 Gene
No data available for Orthologs for RPL23P11 Gene
Paralogs for RPL23P11 Gene
No data available for Paralogs for RPL23P11 Gene
Variants for RPL23P11 Gene
Additional Variant Information for RPL23P11 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL23P11
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23P11 Gene
Disorders for RPL23P11 Gene
Additional Disease Information for RPL23P11
- Genetic Association Database
- (GAD)
No disorders were found for RPL23P11 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23P11 Gene
Publications for RPL23P11 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema. (PMID: 20709820) Kong X … ECLIPSE Study NETT Investigators (American journal of respiratory and critical care medicine 2011) 41
- Genome-wide association analysis of gender differences in major depressive disorder in the Netherlands NESDA and NTR population-based samples. (PMID: 21621269) Aragam N … Pan Y (Journal of affective disorders 2011) 41
- Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41
No data available for Mastermind for RPL23P11 Gene
Products for RPL23P11 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23P11
- Origene Custom Protein Services for RPL23P11
- Browse OriGene Inhibitory RNA Products For RPL23P11
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL23P11
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL23P11
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL23P11
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL23P11
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL23P11
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL23P11
Sources for RPL23P11 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB