Aliases for RPL23AP86 Gene

Aliases for RPL23AP86 Gene

  • Ribosomal Protein L23a Pseudogene 86 2 3 5
  • RPL23AP86 5

External Ids for RPL23AP86 Gene

Summaries for RPL23AP86 Gene

GeneCards Summary for RPL23AP86 Gene

RPL23AP86 (Ribosomal Protein L23a Pseudogene 86) is a Pseudogene.

Additional gene information for RPL23AP86 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP86 Gene

Genomics for RPL23AP86 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL23AP86 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J002926 Enhancer 0.9 ENCODE 0.7 -4.1 -4103 1.7 CREB1 CTCF ZNF629 ZNF692 ZHX2 MTA2 ZNF143 ZIC2 RXRB REST tRX-Lys-NNN-1-1 FLYWCH1 KREMEN2 PAQR4 PKMYT1 SRRM2-AS1 PRSS27 ENSG00000255513 ENSG00000272079 RPL23AP86
GH16J002924 Enhancer 0.7 Ensembl ENCODE CraniofacialAtlas 0.7 -2.0 -2019 1.8 POLR2A SMARCA4 KLF1 FLYWCH1 KREMEN2 PAQR4 PKMYT1 SRRM2-AS1 PRSS27 ENSG00000263235 RPL23AP86 tRX-Lys-NNN-1-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP86 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL23AP86 Gene

Genomic Locations for RPL23AP86 Gene
chr16:2,922,223-2,923,277
(GRCh38/hg38)
Size:
1,055 bases
Orientation:
Minus strand
chr16:2,972,659-2,973,230
(GRCh37/hg19)
Size:
572 bases
Orientation:
Minus strand

Genomic View for RPL23AP86 Gene

Genes around RPL23AP86 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP86 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP86 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP86 Gene

Proteins for RPL23AP86 Gene

Post-translational modifications for RPL23AP86 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP86 Gene

Domains & Families for RPL23AP86 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP86 Gene

Function for RPL23AP86 Gene

Phenotypes From GWAS Catalog for RPL23AP86 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP86 Gene

Localization for RPL23AP86 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP86 Gene

Pathways & Interactions for RPL23AP86 Gene

PathCards logo

SuperPathways for RPL23AP86 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL23AP86 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23AP86 Gene

Drugs & Compounds for RPL23AP86 Gene

No Compound Related Data Available

Transcripts for RPL23AP86 Gene

mRNA/cDNA for RPL23AP86 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP86 Gene

No ASD Table

Relevant External Links for RPL23AP86 Gene

GeneLoc Exon Structure for
RPL23AP86

Expression for RPL23AP86 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP86 Gene

genes like me logo Genes that share expression patterns with RPL23AP86: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP86 Gene

Orthologs for RPL23AP86 Gene

Evolution for RPL23AP86 Gene

ENSEMBL:
Gene Tree for RPL23AP86 (if available)
TreeFam:
Gene Tree for RPL23AP86 (if available)

No data available for Orthologs for RPL23AP86 Gene

Paralogs for RPL23AP86 Gene

No data available for Paralogs for RPL23AP86 Gene

Variants for RPL23AP86 Gene

Additional Variant Information for RPL23AP86 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP86

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP86 Gene

Disorders for RPL23AP86 Gene

No disorders were found for RPL23AP86 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP86 Gene

Publications for RPL23AP86 Gene

No publications were found for RPL23AP86 Gene.

No data available for Mastermind for RPL23AP86 Gene

Products for RPL23AP86 Gene

Sources for RPL23AP86 Gene