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Aliases for RPL23AP80 Gene

Subcategory (RNA class) for RPL23AP80 Gene


Aliases for RPL23AP80 Gene

  • Ribosomal Protein L23a Pseudogene 80 2 3 5
  • RPL23A_35_1661 3

External Ids for RPL23AP80 Gene

ORGUL Members for RPL23AP80 Gene

Previous GeneCards Identifiers for RPL23AP80 Gene

  • GC19M052992
  • GC19M048299

Summaries for RPL23AP80 Gene

GeneCards Summary for RPL23AP80 Gene

RPL23AP80 (Ribosomal Protein L23a Pseudogene 80) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL23AP80 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP80 Gene

Genomics for RPL23AP80 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP80 Gene

Promoters and enhancers for RPL23AP80 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J047798 Enhancer 0.5 FANTOM5 Ensembl 0.7 -3.3 -3299 1.2 CABP5 CRX SNORD23 NOP53 SULT2A1 SELENOW RPL23AP80 TPRX1
GH19J047813 Enhancer 0.8 Ensembl ENCODE 0.4 -19.1 -19099 0.8 CTCF ZNF148 REST KLF9 ZBTB48 SMC3 KLF8 RAD21 ZNF143 KLF10 TPRX1 RPL23AP80
GH19J047809 Enhancer 0.6 ENCODE 0.4 -15.0 -14957 0.2 SP7 KLF14 PRDM1 CEBPB EGR1 KLF13 ZFHX2 ZNF18 FOS RARA TPRX1 RPL23AP80
GH19J047799 Enhancer 0.2 FANTOM5 0.7 -4.2 -4188 0.2 CRX SNORD23 NOP53 SULT2A1 CABP5 RPL23AP80 TPRX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP80 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP80 Gene

Genomic Locations for RPL23AP80 Gene
437 bases
Minus strand
437 bases
Minus strand

Genomic View for RPL23AP80 Gene

Genes around RPL23AP80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP80 Gene

Proteins for RPL23AP80 Gene

Post-translational modifications for RPL23AP80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP80 Gene

Domains & Families for RPL23AP80 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP80 Gene

Function for RPL23AP80 Gene

Phenotypes From GWAS Catalog for RPL23AP80 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP80 Gene

Localization for RPL23AP80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP80 Gene

Pathways & Interactions for RPL23AP80 Gene

PathCards logo

SuperPathways for RPL23AP80 Gene

No Data Available

Interacting Proteins for RPL23AP80 Gene

Gene Ontology (GO) - Biological Process for RPL23AP80 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL23AP80 Gene

Drugs & Compounds for RPL23AP80 Gene

No Compound Related Data Available

Transcripts for RPL23AP80 Gene

mRNA/cDNA for RPL23AP80 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP80 Gene

No ASD Table

Relevant External Links for RPL23AP80 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL23AP80 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP80 Gene

mRNA expression in normal human tissues for RPL23AP80 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP80 Gene:

genes like me logo Genes that share expression patterns with RPL23AP80: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP80 Gene

Orthologs for RPL23AP80 Gene

Evolution for RPL23AP80 Gene

Gene Tree for RPL23AP80 (if available)
Gene Tree for RPL23AP80 (if available)

No data available for Orthologs for RPL23AP80 Gene

Paralogs for RPL23AP80 Gene

No data available for Paralogs for RPL23AP80 Gene

Variants for RPL23AP80 Gene

Additional Variant Information for RPL23AP80 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP80 Gene

Disorders for RPL23AP80 Gene

No disorders were found for RPL23AP80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP80 Gene

Publications for RPL23AP80 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP80 Gene

Sources for RPL23AP80 Gene

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