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Aliases for RPL23AP8 Gene

Aliases for RPL23AP8 Gene

  • Ribosomal Protein L23a Pseudogene 8 2 3 5
  • Ribosomal Protein L23a Pseudogene 9 2 3
  • RPL23A_34_1351 3
  • RPL23AP9 3

External Ids for RPL23AP8 Gene

Previous HGNC Symbols for RPL23AP8 Gene

  • RPL23AP9

Previous GeneCards Identifiers for RPL23AP8 Gene

  • GC14U900542
  • GC14P034235
  • GC14P035164

Summaries for RPL23AP8 Gene

GeneCards Summary for RPL23AP8 Gene

RPL23AP8 (Ribosomal Protein L23a Pseudogene 8) is a Pseudogene.

Additional gene information for RPL23AP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP8 Gene

Genomics for RPL23AP8 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP8 Gene

Promoters and enhancers for RPL23AP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I034692 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 -1.0 -957 1.7 ELF3 MLX ARID4B SIN3A DMAP1 ZNF48 ZSCAN9 ETS1 SCRT2 HMG20B GC14P034695 RPL23AP8 CFL2 RNU6-1261P
GH14I034837 Enhancer 1.2 Ensembl ENCODE dbSUPER 8.3 +143.8 143786 1.4 ELF3 FOXA2 MLX ARID4B DNMT3B ZNF48 ZSCAN9 RARA SLC30A9 CREM FAM177A1 RPL23AP8 PPP2R3C GC14M034846 BAZ1A RPL12P6
GH14I034855 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 8.3 +163.0 163032 2.5 ATF4 CEBPB ATF7 ATF2 SNX6 FAM177A1 RPL23AP8 BAZ1A KIAA0391 RALGAPA1 PPP2R3C PSMA6 RNU7-41P ENSG00000258738
GH14I034677 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -16.0 -15991 1.5 PKNOX1 ZSCAN4 INSM2 KLF17 FEZF1 ZNF2 ZNF335 ZNF213 ZNF366 ZSCAN5C SNX6 CFL2 EAPP RNU6-1261P RPL23AP8
GH14I034685 Enhancer 0.7 dbSUPER 0.4 -7.9 -7911 1.2 ELF3 SOX13 FOXA2 SAP130 ZNF7 TEAD3 FOXK2 NR2F6 THAP11 GATAD2A SNX6 RPL23AP8 RNU6-1261P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP8 Gene

Genomic Locations for RPL23AP8 Gene
chr14:34,694,155-34,694,693
(GRCh38/hg38)
Size:
539 bases
Orientation:
Plus strand
chr14:35,163,361-35,163,899
(GRCh37/hg19)

Genomic View for RPL23AP8 Gene

Genes around RPL23AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP8 Gene

Proteins for RPL23AP8 Gene

Post-translational modifications for RPL23AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP8 Gene

Domains & Families for RPL23AP8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP8 Gene

Function for RPL23AP8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP8 Gene

Localization for RPL23AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP8 Gene

Pathways & Interactions for RPL23AP8 Gene

SuperPathways for RPL23AP8 Gene

No Data Available

Interacting Proteins for RPL23AP8 Gene

Gene Ontology (GO) - Biological Process for RPL23AP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP8 Gene

Drugs & Compounds for RPL23AP8 Gene

No Compound Related Data Available

Transcripts for RPL23AP8 Gene

mRNA/cDNA for RPL23AP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP8 Gene

No ASD Table

Relevant External Links for RPL23AP8 Gene

GeneLoc Exon Structure for
RPL23AP8
ECgene alternative splicing isoforms for
RPL23AP8

Expression for RPL23AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP8 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP8 Gene

This gene is overexpressed in Testis (x19.4) and Heart - Atrial Appendage (x6.8).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP8 Gene:

RPL23AP8
genes like me logo Genes that share expression patterns with RPL23AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP8 Gene

Orthologs for RPL23AP8 Gene

Evolution for RPL23AP8 Gene

ENSEMBL:
Gene Tree for RPL23AP8 (if available)
TreeFam:
Gene Tree for RPL23AP8 (if available)

No data available for Orthologs for RPL23AP8 Gene

Paralogs for RPL23AP8 Gene

No data available for Paralogs for RPL23AP8 Gene

Variants for RPL23AP8 Gene

Additional Variant Information for RPL23AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP8 Gene

Disorders for RPL23AP8 Gene

No disorders were found for RPL23AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP8 Gene

Publications for RPL23AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP8 Gene

Sources for RPL23AP8 Gene

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