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Aliases for RPL23AP74 Gene
Aliases for RPL23AP74 Gene
External Ids for RPL23AP74 Gene
- HGNC: 36148
- Entrez Gene: 729617
- Ensembl: ENSG00000227694
Previous GeneCards Identifiers for RPL23AP74 Gene
- GC17P056501
- GC17P059144
Summaries for RPL23AP74 Gene
GeneCards Summary for RPL23AP74 Gene
RPL23AP74 (Ribosomal Protein L23a Pseudogene 74) is a Pseudogene.
Additional gene information for RPL23AP74 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP74 Gene
Genomics for RPL23AP74 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL23AP74 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J061069 | Promoter | 0.4 | Ensembl | 600.7 | +0.1 | 146 | 0.4 | ARID3A | ENSG00000267207 ENSG00000267449 RPL23AP74 lnc-TBX2-7 TBX2 BCAS3 | |
| GH17J061064 | Enhancer | 1 | Ensembl ENCODE | 0.7 | -4.6 | -4554 | 2.2 | GATAD2A ATF7 ZNF629 PRDM1 RXRB SP1 CEBPA SOX13 ZNF211 ETS1 | HEATR6 ENSG00000267207 RPL23AP74 HSALNG0117852 TBX2 BCAS3 | |
| GH17J061057 | Enhancer | 0.5 | Ensembl | 0.4 | -12.3 | -12254 | 1.6 | CEBPG IKZF2 ATF7 IKZF1 JUN TBX21 MTA2 BCL6B | TBX2 RPL23AP74 ENSG00000267207 HSALNG0117852 BCAS3 | |
| GH17J061058 | Enhancer | 0.4 | Ensembl | 0.4 | -11.0 | -10954 | 0.2 | CEBPG ZNF217 NFXL1 COPS2 | TBX2-AS1 LINC02875 RPL23AP74 ENSG00000267207 HSALNG0117852 TBX2 BCAS3 | |
| GH17J061053 | Enhancer | 0.4 | Ensembl | 0.4 | -16.3 | -16254 | 1.2 | NONO FOXA1 ZNF217 NCOA3 | RPL23AP74 ENSG00000267207 HSALNG0117852 TBX2 BCAS3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL23AP74 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL23AP74 Gene
Genomic Locations for RPL23AP74 Gene
- chr17:61,069,855-61,070,384
- (GRCh38/hg38)
- Size:
- 530 bases
- Orientation:
- Plus strand
- chr17:59,144,569-59,148,308
- (GRCh37/hg19)
- Size:
- 3,740 bases
- Orientation:
- Plus strand
Genomic View for RPL23AP74 Gene
Genes around RPL23AP74 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q23.2 by HGNC
- 17q23.2 by Entrez Gene
- 17q23.2 by Ensembl
RPL23AP74 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL23AP74 Gene
Proteins for RPL23AP74 Gene
Post-translational modifications for RPL23AP74 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23AP74
- Origene Custom Protein Services for RPL23AP74
No data available for DME Specific Peptides for RPL23AP74 Gene
Domains & Families for RPL23AP74 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP74 Gene
Function for RPL23AP74 Gene
Phenotypes for RPL23AP74 Gene
- GenomeRNAi human phenotypes for RPL23AP74:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL23AP74 - Select products 50% OFF >
- * RPL23AP74 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL23AP74
miRNA Products
Inhibitory RNA Products
- Origene sirna and RNAi products in human, mouse, rat for RPL23AP74
- Browse OriGene Inhibitory RNA Products For RPL23AP74
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP74 Gene
Localization for RPL23AP74 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP74 Gene
Transcripts for RPL23AP74 Gene
mRNA/cDNA for RPL23AP74 Gene
- 1 REFSEQ mRNAs :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000437246 471 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL23AP74 - Select products 50% OFF >
- * RPL23AP74 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL23AP74
miRNA Products
Inhibitory RNA Products
- Origene sirna and RNAi products in human, mouse, rat for RPL23AP74
- Browse OriGene Inhibitory RNA Products For RPL23AP74
Clone Products
Relevant External Links for RPL23AP74 Gene
- GeneLoc Exon Structure for
- RPL23AP74
Expression for RPL23AP74 Gene
Primer Products
-
OriGene qPCR primer pairs for RPL23AP74
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP74 Gene
Orthologs for RPL23AP74 Gene
No data available for Orthologs for RPL23AP74 Gene
Paralogs for RPL23AP74 Gene
No data available for Paralogs for RPL23AP74 Gene
Variants for RPL23AP74 Gene
Additional Variant Information for RPL23AP74 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL23AP74
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP74 Gene
Disorders for RPL23AP74 Gene
No disorders were found for RPL23AP74 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP74 Gene
Publications for RPL23AP74 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3
Products for RPL23AP74 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23AP74
- Origene Custom Protein Services for RPL23AP74
- Origene sirna and RNAi products in human, mouse, rat for RPL23AP74
- Browse OriGene Inhibitory RNA Products For RPL23AP74
- OriGene qPCR primer pairs for RPL23AP74
- Browse CRISPR knockouts for RPL23AP74
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL23AP74
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- VectorBuilder Custom and pre-made DNA vectors for RPL23AP74 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for RPL23AP74 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for RPL23AP74 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for RPL23AP74 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for RPL23AP74
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL23AP74
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL23AP74
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL23AP74
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL23AP74
Sources for RPL23AP74 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB