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Aliases for RPL23AP71 Gene

Aliases for RPL23AP71 Gene

  • Ribosomal Protein L23a Pseudogene 71 2 3 5
  • RPL23A_33_1349 3

External Ids for RPL23AP71 Gene

Previous GeneCards Identifiers for RPL23AP71 Gene

  • GC14P034027
  • GC14P034956

Summaries for RPL23AP71 Gene

GeneCards Summary for RPL23AP71 Gene

RPL23AP71 (Ribosomal Protein L23a Pseudogene 71) is a Pseudogene.

Additional gene information for RPL23AP71 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP71 Gene

Genomics for RPL23AP71 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP71 Gene

Promoters and enhancers for RPL23AP71 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I034495 Enhancer 1.2 Ensembl ENCODE 0.4 +11.5 11494 3.5 FOXA2 MLX ZFP64 ARID4B SLC30A9 ZNF766 ZNF143 FOS DEK SP5 RPS19P3 SNX6 SPTSSA KIAA0391 RPL23AP71 EAPP
GH14I034536 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.2 +52.8 52756 4.1 HDGF PKNOX1 SMAD1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 EAPP LOC105370447 SNX6 RPL23AP71
GH14I034464 Enhancer 1.2 Ensembl ENCODE 0.3 -20.6 -20630 1.3 HDGF ATF1 FOXA2 ARNT ETS1 TCF12 POLR2B ZNF766 CBX5 E2F8 RPS19P3 EAPP EGLN3 RPL23AP71
GH14I034500 Enhancer 0.8 ENCODE 0.4 +14.5 14539 0.5 ELF3 SOX13 TFAP4 SAP130 ARID4B CEBPG ZNF644 RARA TEAD3 FOXK2 SPTSSA RPL23AP71 EAPP
GH14I034505 Enhancer 0.7 ENCODE 0.3 +20.0 20040 1.3 FOXA2 ZFP64 FEZF1 ZNF644 RARA PRDM10 ZNF600 TCF7L2 ZBTB20 GATAD2A SPTSSA SNX6 RPL23AP71 EAPP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP71 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP71 Gene

Genomic Locations for RPL23AP71 Gene
chr14:34,485,978-34,486,503
(GRCh38/hg38)
Size:
526 bases
Orientation:
Plus strand
chr14:34,955,184-34,955,709
(GRCh37/hg19)

Genomic View for RPL23AP71 Gene

Genes around RPL23AP71 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP71 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP71 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP71 Gene

Proteins for RPL23AP71 Gene

Post-translational modifications for RPL23AP71 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP71 Gene

Domains & Families for RPL23AP71 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP71 Gene

Function for RPL23AP71 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP71 Gene

Localization for RPL23AP71 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP71 Gene

Pathways & Interactions for RPL23AP71 Gene

SuperPathways for RPL23AP71 Gene

No Data Available

Interacting Proteins for RPL23AP71 Gene

Gene Ontology (GO) - Biological Process for RPL23AP71 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP71 Gene

Drugs & Compounds for RPL23AP71 Gene

No Compound Related Data Available

Transcripts for RPL23AP71 Gene

mRNA/cDNA for RPL23AP71 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP71 Gene

No ASD Table

Relevant External Links for RPL23AP71 Gene

GeneLoc Exon Structure for
RPL23AP71
ECgene alternative splicing isoforms for
RPL23AP71

Expression for RPL23AP71 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP71 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP71 Gene:

RPL23AP71
genes like me logo Genes that share expression patterns with RPL23AP71: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP71 Gene

Orthologs for RPL23AP71 Gene

Evolution for RPL23AP71 Gene

ENSEMBL:
Gene Tree for RPL23AP71 (if available)
TreeFam:
Gene Tree for RPL23AP71 (if available)

No data available for Orthologs for RPL23AP71 Gene

Paralogs for RPL23AP71 Gene

No data available for Paralogs for RPL23AP71 Gene

Variants for RPL23AP71 Gene

Additional Variant Information for RPL23AP71 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP71

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP71 Gene

Disorders for RPL23AP71 Gene

No disorders were found for RPL23AP71 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP71 Gene

Publications for RPL23AP71 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP71 Gene

Sources for RPL23AP71 Gene

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