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Aliases for RPL23AP7 Gene

Aliases for RPL23AP7 Gene

  • Ribosomal Protein L23a Pseudogene 7 2 3 5
  • Ribosomal Protein L23a-Like 1 3
  • RPL23A_6_267 3
  • BA395L14.9 3
  • RPL23AL1 3

External Ids for RPL23AP7 Gene

Previous GeneCards Identifiers for RPL23AP7 Gene

  • GC02U990310
  • GC02M112289
  • GC02M114275
  • GC02M114464
  • GC02M114085
  • GC02M114370
  • GC07M000122

Summaries for RPL23AP7 Gene

GeneCards Summary for RPL23AP7 Gene

RPL23AP7 (Ribosomal Protein L23a Pseudogene 7) is a Pseudogene.

Additional gene information for RPL23AP7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP7 Gene

Genomics for RPL23AP7 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP7 Gene

Promoters and enhancers for RPL23AP7 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I113626 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 561.6 -0.1 -136 1.5 HDAC1 ELF3 ATF1 RB1 ARID4B SIN3A DMAP1 BMI1 NCOA2 ZNF335 RABL2A RPL23AP7 PIR42427 DDX11L2
GH02I113754 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 20.2 -129.2 -129193 3.1 HDGF SMAD1 FOXA2 ARNT ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 SLC35F5 ENSG00000227359 DDX11L2 RPL23AP7 ENSG00000228857 MIR4782
GH02I113602 Enhancer 1 ENCODE 21.5 +23.2 23165 2 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 DDX11L2 RPL23AP7 RABL2A ENSG00000227359 PAX8-AS1 PSD4 FOXD4L1 ENSG00000279267
GH02I113885 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.9 -263.7 -263701 9.8 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC ACTR3 LOC101060091 ENSG00000270019 SLC35F5 WASH2P ENSG00000244063 LINC01191 RPL23AP7 DDX11L2 CBWD2
GH02I113623 Enhancer 0.4 Ensembl 37 +3.4 3437 0.6 ZNF316 MAFG EMSY RPL23AP7 ENSG00000279267
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP7 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the RPL23AP7 gene promoter:

Genomic Locations for RPL23AP7 Gene

Genomic Locations for RPL23AP7 Gene
16,637 bases
Minus strand

Genomic View for RPL23AP7 Gene

Genes around RPL23AP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP7 Gene

Proteins for RPL23AP7 Gene

Post-translational modifications for RPL23AP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP7 Gene

Domains & Families for RPL23AP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP7 Gene

Function for RPL23AP7 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP7 Gene

Localization for RPL23AP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP7 Gene

Pathways & Interactions for RPL23AP7 Gene

SuperPathways for RPL23AP7 Gene

No Data Available

Interacting Proteins for RPL23AP7 Gene

Gene Ontology (GO) - Biological Process for RPL23AP7 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL23AP7 Gene

Drugs & Compounds for RPL23AP7 Gene

No Compound Related Data Available

Transcripts for RPL23AP7 Gene

mRNA/cDNA for RPL23AP7 Gene

Unigene Clusters for RPL23AP7 Gene

Ribosomal protein L23a pseudogene 7:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP7 Gene

No ASD Table

Relevant External Links for RPL23AP7 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL23AP7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP7 Gene:


SOURCE GeneReport for Unigene cluster for RPL23AP7 Gene:

genes like me logo Genes that share expression patterns with RPL23AP7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP7 Gene

Orthologs for RPL23AP7 Gene

Evolution for RPL23AP7 Gene

Gene Tree for RPL23AP7 (if available)
Gene Tree for RPL23AP7 (if available)

No data available for Orthologs for RPL23AP7 Gene

Paralogs for RPL23AP7 Gene

No data available for Paralogs for RPL23AP7 Gene

Variants for RPL23AP7 Gene

Sequence variations from dbSNP and Humsavar for RPL23AP7 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1001071233 -- 113,612,986(-) T/A genic_downstream_transcript_variant, intron_variant
rs1001084513 -- 113,611,416(-) G/C genic_downstream_transcript_variant, non_coding_transcript_variant
rs1001236335 -- 113,624,466(-) G/C intron_variant
rs1001300608 -- 113,626,696(-) G/A/T intron_variant
rs1001684129 -- 113,623,456(-) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for RPL23AP7 Gene

Variant ID Type Subtype PubMed ID
dgv1164e212 CNV loss 25503493
dgv1165e212 CNV loss 25503493
esv2759085 CNV gain+loss 17122850
esv3584028 CNV loss 25503493
esv3592016 CNV gain 21293372
nsv1001195 CNV gain 25217958
nsv1132505 CNV duplication 24896259
nsv1139730 CNV duplication 24896259
nsv1151721 CNV duplication 26484159
nsv508163 CNV deletion 20534489
nsv582714 CNV gain 21841781
nsv821507 CNV duplication 20802225
nsv961495 CNV duplication 23825009
nsv961642 CNV duplication 23825009
nsv963711 CNV duplication 23825009

Additional Variant Information for RPL23AP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL23AP7 Gene

Disorders for RPL23AP7 Gene

Additional Disease Information for RPL23AP7

No disorders were found for RPL23AP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP7 Gene

Publications for RPL23AP7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. Nucleotide sequence of a cDNA clone (SUBT1) partly homologous to a human subtelomeric repeat sequence. (PMID: 8799457) Lagercrantz J … Lagercrantz S (Biochemistry and molecular biology international 1996) 3 58

Products for RPL23AP7 Gene

Sources for RPL23AP7 Gene

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