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Aliases for RPL23AP65 Gene

Aliases for RPL23AP65 Gene

  • Ribosomal Protein L23a Pseudogene 65 2 3 5
  • RPL23A_27_1119 3

External Ids for RPL23AP65 Gene

Previous GeneCards Identifiers for RPL23AP65 Gene

  • GC11P009585

Summaries for RPL23AP65 Gene

GeneCards Summary for RPL23AP65 Gene

RPL23AP65 (Ribosomal Protein L23a Pseudogene 65) is a Pseudogene.

Additional gene information for RPL23AP65 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP65 Gene

Genomics for RPL23AP65 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP65 Gene

Promoters and enhancers for RPL23AP65 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I009606 Enhancer 0.6 ENCODE 550.8 +1.3 1277 0.9 GATAD2A CTCF TFAP4 FOXA2 ETV1 ARID4B HMG20A RAD21 GABPA ETV4 RPL23AP65 SWAP70 ENSG00000238387 WEE1 RPL21P97 GC11M009608 GC11P009430
GH11I008681 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10 -920.3 -920279 8.7 MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SNORA3B RPL27A GC11P008723 GC11P008725 PIR32700 PIR61800 SNORA3A GC11P008729 GC11P008728 GC11P008726
GH11I009661 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.9 +57.5 57542 4.2 PKNOX1 NFIB SIN3A ZNF48 RAD21 RFX5 ZNF335 GLIS2 ATF7 IKZF2 SWAP70 RPL23AP65 SBF2-AS1 ZNF143 RPL21P97 GC11P009430
GH11I009506 Enhancer 1 Ensembl ENCODE 10.1 -99.1 -99139 1.3 HNRNPUL1 RB1 ARID4B IRF4 RAD21 RFX5 ARID2 ZNF143 ZNF654 ZNF362 WEE1 ZNF143 RPL21P97 SNORA3B ENSG00000238387 RPL27A RPL23AP65 LOC644656 PIR40365 GC11P009430
GH11I009625 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 4.9 +20.7 20709 2.9 JUN MAX EBF1 RAD21 YY1 ZNF664 ZFHX2 POLR2A IKZF2 EGR2 SWAP70 RPL21P97 RPL23AP65 ENSG00000255463 GC11M009621 GC11P009430
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP65 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP65 Gene

Genomic Locations for RPL23AP65 Gene
chr11:9,606,134-9,606,682
(GRCh38/hg38)
Size:
549 bases
Orientation:
Plus strand
chr11:9,627,681-9,628,229
(GRCh37/hg19)

Genomic View for RPL23AP65 Gene

Genes around RPL23AP65 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP65 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP65 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP65 Gene

Proteins for RPL23AP65 Gene

Post-translational modifications for RPL23AP65 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP65 Gene

Domains & Families for RPL23AP65 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP65 Gene

Function for RPL23AP65 Gene

Phenotypes From GWAS Catalog for RPL23AP65 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP65 Gene

Localization for RPL23AP65 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP65 Gene

Pathways & Interactions for RPL23AP65 Gene

SuperPathways for RPL23AP65 Gene

No Data Available

Interacting Proteins for RPL23AP65 Gene

Gene Ontology (GO) - Biological Process for RPL23AP65 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP65 Gene

Drugs & Compounds for RPL23AP65 Gene

No Compound Related Data Available

Transcripts for RPL23AP65 Gene

mRNA/cDNA for RPL23AP65 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP65 Gene

No ASD Table

Relevant External Links for RPL23AP65 Gene

GeneLoc Exon Structure for
RPL23AP65
ECgene alternative splicing isoforms for
RPL23AP65

Expression for RPL23AP65 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP65 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP65 Gene:

RPL23AP65
genes like me logo Genes that share expression patterns with RPL23AP65: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP65 Gene

Orthologs for RPL23AP65 Gene

Evolution for RPL23AP65 Gene

ENSEMBL:
Gene Tree for RPL23AP65 (if available)
TreeFam:
Gene Tree for RPL23AP65 (if available)

No data available for Orthologs for RPL23AP65 Gene

Paralogs for RPL23AP65 Gene

No data available for Paralogs for RPL23AP65 Gene

Variants for RPL23AP65 Gene

Additional Variant Information for RPL23AP65 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP65 Gene

Disorders for RPL23AP65 Gene

No disorders were found for RPL23AP65 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP65 Gene

Publications for RPL23AP65 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP65 Gene

Sources for RPL23AP65 Gene

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