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Aliases for RPL23AP63 Gene

Aliases for RPL23AP63 Gene

  • Ribosomal Protein L23a Pseudogene 63 2 3 5
  • RPL23A_28_1140 3

External Ids for RPL23AP63 Gene

Previous GeneCards Identifiers for RPL23AP63 Gene

  • GC11P043697
  • GC11P043742

Summaries for RPL23AP63 Gene

GeneCards Summary for RPL23AP63 Gene

RPL23AP63 (Ribosomal Protein L23a Pseudogene 63) is a Pseudogene.

Additional gene information for RPL23AP63 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP63 Gene

Genomics for RPL23AP63 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP63 Gene

Promoters and enhancers for RPL23AP63 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J043720 Enhancer 0.2 Ensembl 600.7 +1.6 1645 0.6 ENSG00000283393 RPL23AP63 HSD17B12 MIR129-2 GC11P043728 ENSG00000283341
GH11J043679 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 -37.6 -37640 3.6 SP1 CC2D1A ZFX ELF3 NKRF POLR2A ZNF687 FOS ZNF24 SP7 HSD17B12 RPL23AP63 ENSG00000283341
GH11J043693 Enhancer 0.8 ENCODE 0.3 -24.7 -24710 0.1 CC2D1A CBFA2T2 TRIM24 ZNF639 SMARCA4 MTA1 DPF2 IKZF1 PKNOX1 ZNF24 MIR129-2 HSD17B12 RPL23AP63 ENSG00000283341
GH11J043686 Enhancer 0.6 ENCODE 0.3 -31.5 -31500 1.7 SMARCA4 IKZF1 PKNOX1 TSC22D4 EHMT2 NR2F2 GATA3 HLF TEAD4 CBFA2T3 HSD17B12 MIR129-2 RPL23AP63 ENSG00000283341
GH11J043712 Enhancer 0.3 ENCODE 0.4 -5.9 -5942 1.3 FOS RPL23AP63 HSD17B12 ENSG00000283341
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP63 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP63 Gene

Genomic Locations for RPL23AP63 Gene
chr11:43,718,656-43,719,383
(GRCh38/hg38)
Size:
728 bases
Orientation:
Plus strand
chr11:43,740,220-43,740,733
(GRCh37/hg19)
Size:
514 bases
Orientation:
Plus strand

Genomic View for RPL23AP63 Gene

Genes around RPL23AP63 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP63 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP63 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP63 Gene

Proteins for RPL23AP63 Gene

Post-translational modifications for RPL23AP63 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP63 Gene

Domains & Families for RPL23AP63 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP63 Gene

Function for RPL23AP63 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP63 Gene

Localization for RPL23AP63 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP63 Gene

Pathways & Interactions for RPL23AP63 Gene

PathCards logo

SuperPathways for RPL23AP63 Gene

No Data Available

Interacting Proteins for RPL23AP63 Gene

Gene Ontology (GO) - Biological Process for RPL23AP63 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP63 Gene

Drugs & Compounds for RPL23AP63 Gene

No Compound Related Data Available

Transcripts for RPL23AP63 Gene

mRNA/cDNA for RPL23AP63 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP63 Gene

No ASD Table

Relevant External Links for RPL23AP63 Gene

GeneLoc Exon Structure for
RPL23AP63
ECgene alternative splicing isoforms for
RPL23AP63

Expression for RPL23AP63 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP63 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP63 Gene:

RPL23AP63
genes like me logo Genes that share expression patterns with RPL23AP63: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP63 Gene

Orthologs for RPL23AP63 Gene

Evolution for RPL23AP63 Gene

ENSEMBL:
Gene Tree for RPL23AP63 (if available)
TreeFam:
Gene Tree for RPL23AP63 (if available)

No data available for Orthologs for RPL23AP63 Gene

Paralogs for RPL23AP63 Gene

No data available for Paralogs for RPL23AP63 Gene

Variants for RPL23AP63 Gene

Additional Variant Information for RPL23AP63 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP63

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP63 Gene

Disorders for RPL23AP63 Gene

No disorders were found for RPL23AP63 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP63 Gene

Publications for RPL23AP63 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP63 Gene

Sources for RPL23AP63 Gene

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