Aliases for RPL23AP59 Gene

Aliases for RPL23AP59 Gene

  • Ribosomal Protein L23a Pseudogene 59 2 3 5
  • RPL23A_25_1093 3

External Ids for RPL23AP59 Gene

Previous GeneCards Identifiers for RPL23AP59 Gene

  • GC10U901134
  • GC10P108310

Summaries for RPL23AP59 Gene

GeneCards Summary for RPL23AP59 Gene

RPL23AP59 (Ribosomal Protein L23a Pseudogene 59) is a Pseudogene.

Additional gene information for RPL23AP59 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP59 Gene

Genomics for RPL23AP59 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP59 Gene

Promoters and enhancers for RPL23AP59 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J106505 Enhancer 0.7 Ensembl ENCODE 0.3 -43.5 -43497 2.4 POLR2A FOS CEBPB JUN JUND PKNOX1 EP300 ZNF217 STAT3 RPL23AP59 lnc-SORCS3-16 HSALNG0080472
GH10J106513 Enhancer 0.6 Ensembl ENCODE 0.3 -36.3 -36305 0.8 EP300 FOS JUND FOXA1 POLR2A lnc-SORCS3-16 RPL23AP59 HSALNG0080472
GH10J106509 Enhancer 0.6 ENCODE 0.3 -40.9 -40928 0.2 CUX1 CTBP1 FOS FOXA1 DPF2 GATA3 TCF7L2 ZNF217 SMARCE1 FOSL2 RPL23AP59 lnc-SORCS3-16 HSALNG0080472
GH10J106434 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.1 -111.7 -111680 7.7 FOS STAT3 SETDB1 MYC HSALNG0080472 RPL23AP59 lnc-SORCS3-16
GH10J106500 Enhancer 0.4 Ensembl 0.3 -49.1 -49105 0.8 POLR2A CEBPB STAT3 FOS RPL23AP59 lnc-SORCS3-16 HSALNG0080472
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP59 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP59 Gene

Genomic Locations for RPL23AP59 Gene
chr10:106,550,106-106,551,121
(GRCh38/hg38)
Size:
1,016 bases
Orientation:
Plus strand
chr10:108,309,864-108,310,879
(GRCh37/hg19)
Size:
1,016 bases
Orientation:
Plus strand

Genomic View for RPL23AP59 Gene

Genes around RPL23AP59 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP59 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP59 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP59 Gene

Proteins for RPL23AP59 Gene

Post-translational modifications for RPL23AP59 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP59 Gene

Domains & Families for RPL23AP59 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP59 Gene

Function for RPL23AP59 Gene

Phenotypes From GWAS Catalog for RPL23AP59 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP59 Gene

Localization for RPL23AP59 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP59 Gene

Pathways & Interactions for RPL23AP59 Gene

PathCards logo

SuperPathways for RPL23AP59 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL23AP59 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23AP59 Gene

Drugs & Compounds for RPL23AP59 Gene

No Compound Related Data Available

Transcripts for RPL23AP59 Gene

mRNA/cDNA for RPL23AP59 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP59 Gene

No ASD Table

Relevant External Links for RPL23AP59 Gene

GeneLoc Exon Structure for
RPL23AP59

Expression for RPL23AP59 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP59 Gene

genes like me logo Genes that share expression patterns with RPL23AP59: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP59 Gene

Orthologs for RPL23AP59 Gene

Evolution for RPL23AP59 Gene

ENSEMBL:
Gene Tree for RPL23AP59 (if available)
TreeFam:
Gene Tree for RPL23AP59 (if available)

No data available for Orthologs for RPL23AP59 Gene

Paralogs for RPL23AP59 Gene

No data available for Paralogs for RPL23AP59 Gene

Variants for RPL23AP59 Gene

Additional Variant Information for RPL23AP59 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP59

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP59 Gene

Disorders for RPL23AP59 Gene

No disorders were found for RPL23AP59 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP59 Gene

Publications for RPL23AP59 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL23AP59 Gene

Products for RPL23AP59 Gene

Sources for RPL23AP59 Gene