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Aliases for RPL23AP58 Gene

Subcategory (RNA class) for RPL23AP58 Gene

antisense

Aliases for RPL23AP58 Gene

  • Ribosomal Protein L23a Pseudogene 58 2 3 5
  • RPL23A_23_1090 3

External Ids for RPL23AP58 Gene

ORGUL Members for RPL23AP58 Gene

Previous GeneCards Identifiers for RPL23AP58 Gene

  • GC10U901145
  • GC10M104333

Summaries for RPL23AP58 Gene

GeneCards Summary for RPL23AP58 Gene

RPL23AP58 (Ribosomal Protein L23a Pseudogene 58) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL23AP58 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP58 Gene

Genomics for RPL23AP58 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP58 Gene

Promoters and enhancers for RPL23AP58 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I102578 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.8 -6827 2.3 ZBTB21 CEBPG ZIC2 ZNF335 ZNF121 ZFHX2 ZNF316 VEZF1 SCRT2 MAFK MFSD13A ACTR1A SUFU C10orf95 NFKB2 AS3MT RPL23AP58 GC10P102592 GC10M102382 GC10M102383
GH10I102583 Enhancer 1 ENCODE dbSUPER 0.4 -10.8 -10774 0.2 RB1 ARID4B KLF17 MZF1 RAD21 RFX5 ZNF143 RCOR1 CREM THAP11 GC10P102592 RPL23AP58 SUFU GC10M102382 GC10M102383
GH10I102555 Enhancer 0.5 ENCODE 0.4 +16.9 16913 1 ZFHX2 EGR1 FOS EGR2 MFSD13A RPL23AP58 GC10P102525 SUFU GC10M102382 GC10M102383
GH10I102545 Enhancer 0.6 Ensembl ENCODE 0.3 +26.5 26486 1.5 ZNF341 FOS MFSD13A GC10P102525 RPL23AP58 SUFU GC10M102382 GC10M102383
GH10I102542 Enhancer 0.5 ENCODE 0.3 +30.3 30253 1.1 SRF ATF1 ZNF629 ATF7 FOS ATF2 MFSD13A ACTR1A GC10P102525 RPL23AP58 SUFU GC10M102382 GC10M102383
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP58 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP58 Gene

Genomic Locations for RPL23AP58 Gene
chr10:102,572,757-102,573,225
(GRCh38/hg38)
Size:
469 bases
Orientation:
Minus strand
chr10:104,332,514-104,332,982
(GRCh37/hg19)

Genomic View for RPL23AP58 Gene

Genes around RPL23AP58 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP58 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP58 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP58 Gene

Proteins for RPL23AP58 Gene

Post-translational modifications for RPL23AP58 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP58 Gene

Domains & Families for RPL23AP58 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP58 Gene

Function for RPL23AP58 Gene

Phenotypes From GWAS Catalog for RPL23AP58 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP58 Gene

Localization for RPL23AP58 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP58 Gene

Pathways & Interactions for RPL23AP58 Gene

SuperPathways for RPL23AP58 Gene

No Data Available

Interacting Proteins for RPL23AP58 Gene

Gene Ontology (GO) - Biological Process for RPL23AP58 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP58 Gene

Drugs & Compounds for RPL23AP58 Gene

No Compound Related Data Available

Transcripts for RPL23AP58 Gene

mRNA/cDNA for RPL23AP58 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP58 Gene

No ASD Table

Relevant External Links for RPL23AP58 Gene

GeneLoc Exon Structure for
RPL23AP58
ECgene alternative splicing isoforms for
RPL23AP58

Expression for RPL23AP58 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP58 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP58 Gene:

RPL23AP58
genes like me logo Genes that share expression patterns with RPL23AP58: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP58 Gene

Orthologs for RPL23AP58 Gene

Evolution for RPL23AP58 Gene

ENSEMBL:
Gene Tree for RPL23AP58 (if available)
TreeFam:
Gene Tree for RPL23AP58 (if available)

No data available for Orthologs for RPL23AP58 Gene

Paralogs for RPL23AP58 Gene

No data available for Paralogs for RPL23AP58 Gene

Variants for RPL23AP58 Gene

Additional Variant Information for RPL23AP58 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP58

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP58 Gene

Disorders for RPL23AP58 Gene

No disorders were found for RPL23AP58 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP58 Gene

Publications for RPL23AP58 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP58 Gene

Sources for RPL23AP58 Gene

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