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Aliases for RPL23AP51 Gene

Aliases for RPL23AP51 Gene

  • Ribosomal Protein L23a Pseudogene 51 2 3
  • RPL23A_18_782 3
  • AC007161.1 5

External Ids for RPL23AP51 Gene

Previous GeneCards Identifiers for RPL23AP51 Gene

  • GC07U902572

Summaries for RPL23AP51 Gene

GeneCards Summary for RPL23AP51 Gene

RPL23AP51 (Ribosomal Protein L23a Pseudogene 51) is a Pseudogene.

Additional gene information for RPL23AP51 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP51 Gene

Genomics for RPL23AP51 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP51 Gene

Promoters and enhancers for RPL23AP51 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I007731 Enhancer 1 Ensembl ENCODE 10.2 +10.1 10107 2.6 ELF3 FOXA2 MLX ARID4B FEZF1 THRB RARA SLC30A9 ZNF335 CREM GLCCI1 LOC100505921 RPL23AP51 RPA3 LOC100533631 ENSG00000283549 UMAD1
GH07I007761 Enhancer 1 Ensembl ENCODE 0.4 -19.6 -19552 2.2 MEIS2 CTCF IRF2 PKNOX1 RB1 RAD21 RFX5 FOSL1 CTBP1 ZNF766 GLCCI1 LOC100505921 RPL23AP51 ENSG00000283549 UMAD1 RNU6-534P
GH07I007763 Enhancer 1 Ensembl ENCODE 0.3 -22.4 -22394 2.1 CLOCK BATF IRF4 ATF7 ETV6 FOS BCLAF1 IKZF2 RUNX3 JUNB RPL23AP51 ENSG00000283549 UMAD1 RNU6-534P
GH07I007771 Enhancer 0.8 Ensembl ENCODE 0.3 -29.9 -29890 1.5 PKNOX1 JUNB BATF PRDM6 GATA3 PRDM1 RUNX3 IKZF2 RPL23AP51 ENSG00000283549 RNU6-534P UMAD1
GH07I007794 Enhancer 1.1 Ensembl ENCODE 0.2 -54.5 -54456 5.8 PKNOX1 FOXA2 SIN3A FEZF1 TCF12 ZNF766 ELK1 FOS REST ATF4 GLCCI1 LOC100505921 RPL23AP51 RNU6-534P ENSG00000283549 UMAD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP51 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP51 Gene

Genomic Locations for RPL23AP51 Gene
chr7:7,738,524-7,742,574
(GRCh38/hg38)
Size:
4,051 bases
Orientation:
Minus strand
chr7:7,781,722-7,782,193
(GRCh37/hg19)

Genomic View for RPL23AP51 Gene

Genes around RPL23AP51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP51 Gene

Proteins for RPL23AP51 Gene

Post-translational modifications for RPL23AP51 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP51 Gene

Domains & Families for RPL23AP51 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP51 Gene

Function for RPL23AP51 Gene

Phenotypes From GWAS Catalog for RPL23AP51 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP51 Gene

Localization for RPL23AP51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP51 Gene

Pathways & Interactions for RPL23AP51 Gene

SuperPathways for RPL23AP51 Gene

No Data Available

Interacting Proteins for RPL23AP51 Gene

Gene Ontology (GO) - Biological Process for RPL23AP51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP51 Gene

Drugs & Compounds for RPL23AP51 Gene

No Compound Related Data Available

Transcripts for RPL23AP51 Gene

mRNA/cDNA for RPL23AP51 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP51 Gene

No ASD Table

Relevant External Links for RPL23AP51 Gene

GeneLoc Exon Structure for
RPL23AP51
ECgene alternative splicing isoforms for
RPL23AP51

Expression for RPL23AP51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP51 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP51 Gene

This gene is overexpressed in Testis (x24.1) and Stomach (x11.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP51 Gene:

RPL23AP51
genes like me logo Genes that share expression patterns with RPL23AP51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP51 Gene

Orthologs for RPL23AP51 Gene

Evolution for RPL23AP51 Gene

ENSEMBL:
Gene Tree for RPL23AP51 (if available)
TreeFam:
Gene Tree for RPL23AP51 (if available)

No data available for Orthologs for RPL23AP51 Gene

Paralogs for RPL23AP51 Gene

No data available for Paralogs for RPL23AP51 Gene

Variants for RPL23AP51 Gene

Additional Variant Information for RPL23AP51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP51 Gene

Disorders for RPL23AP51 Gene

Additional Disease Information for RPL23AP51

Genetic Association Database
(GAD)

No disorders were found for RPL23AP51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP51 Gene

Publications for RPL23AP51 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3. (PMID: 21216879) Kaplan RC … Wallaschofski H (Human molecular genetics 2011) 44 58
  3. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58
  4. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58

Products for RPL23AP51 Gene

Sources for RPL23AP51 Gene

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