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Aliases for RPL23AP50 Gene

Subcategory (RNA class) for RPL23AP50 Gene


Aliases for RPL23AP50 Gene

  • Ribosomal Protein L23a Pseudogene 50 2 3 5
  • RPL23A_20_731 3

External Ids for RPL23AP50 Gene

ORGUL Members for RPL23AP50 Gene

Previous GeneCards Identifiers for RPL23AP50 Gene

  • GC06U901589
  • GC06P108254
  • GC06P108256
  • GC06P108258

Summaries for RPL23AP50 Gene

GeneCards Summary for RPL23AP50 Gene

RPL23AP50 (Ribosomal Protein L23a Pseudogene 50) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPL23AP50 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP50 Gene

Genomics for RPL23AP50 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP50 Gene

Promoters and enhancers for RPL23AP50 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I107972 Enhancer 0.7 ENCODE 11 +41.2 41229 2 PKNOX1 SAP130 ARID4B NEUROD1 RARA ZKSCAN1 TEAD3 CTBP1 NR2F6 ZNF444 RNU6-437P RPL23AP50 SEC63 ENSG00000224987
GH06I107954 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 0.3 +25.3 25293 5.3 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ENSG00000272476 SEC63 SCML4 RPL23AP50
GH06I107952 Enhancer 0.9 ENCODE 0.3 +21.0 20992 0.2 FOXA2 MLX ARID4B FEZF1 DMAP1 YY1 ZNF121 GLIS2 ZNF213 RXRA ENSG00000272476 SEC63 RPL23AP50
GH06I107941 Enhancer 0.6 ENCODE 0.4 +10.0 10032 0.2 MTA2 TEAD4 BHLHE40 TAL1 CBFA2T3 DPF2 EP300 TCF12 GATA2 NCOR1 RPL23AP50 ENSG00000272476 SEC63
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP50 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP50 Gene

Genomic Locations for RPL23AP50 Gene
455 bases
Plus strand

Genomic View for RPL23AP50 Gene

Genes around RPL23AP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP50 Gene

Proteins for RPL23AP50 Gene

Post-translational modifications for RPL23AP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP50 Gene

Domains & Families for RPL23AP50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP50 Gene

Function for RPL23AP50 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP50 Gene

Localization for RPL23AP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP50 Gene

Pathways & Interactions for RPL23AP50 Gene

SuperPathways for RPL23AP50 Gene

No Data Available

Interacting Proteins for RPL23AP50 Gene

Gene Ontology (GO) - Biological Process for RPL23AP50 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL23AP50 Gene

Drugs & Compounds for RPL23AP50 Gene

No Compound Related Data Available

Transcripts for RPL23AP50 Gene

mRNA/cDNA for RPL23AP50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP50 Gene

No ASD Table

Relevant External Links for RPL23AP50 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL23AP50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP50 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP50 Gene:

genes like me logo Genes that share expression patterns with RPL23AP50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP50 Gene

Orthologs for RPL23AP50 Gene

Evolution for RPL23AP50 Gene

Gene Tree for RPL23AP50 (if available)
Gene Tree for RPL23AP50 (if available)

No data available for Orthologs for RPL23AP50 Gene

Paralogs for RPL23AP50 Gene

No data available for Paralogs for RPL23AP50 Gene

Variants for RPL23AP50 Gene

Additional Variant Information for RPL23AP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP50 Gene

Disorders for RPL23AP50 Gene

Additional Disease Information for RPL23AP50

Genetic Association Database

No disorders were found for RPL23AP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP50 Gene

Publications for RPL23AP50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. (PMID: 20889312) Wang KS … Aragam N (Schizophrenia research 2010) 44 58

Products for RPL23AP50 Gene

Sources for RPL23AP50 Gene

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