Aliases for RPL23AP37 Gene

Aliases for RPL23AP37 Gene

  • Ribosomal Protein L23a Pseudogene 37 2 3 5
  • RPL23A_5_234 3
  • RPL23AP37 5

External Ids for RPL23AP37 Gene

Previous GeneCards Identifiers for RPL23AP37 Gene

  • GC02M064427
  • GC02M064575

Summaries for RPL23AP37 Gene

GeneCards Summary for RPL23AP37 Gene

RPL23AP37 (Ribosomal Protein L23a Pseudogene 37) is a Pseudogene.

Additional gene information for RPL23AP37 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP37 Gene

Genomics for RPL23AP37 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL23AP37 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J064348 Enhancer 0.4 Ensembl 250.7 -1.2 -1151 1 FOSL1 JUND POLR2A RPL23AP37 ENSG00000238201 PRELID1P6 lnc-LGALSL-6 RF00017-3212 LGALSL PELI1
GH02J064354 Enhancer 1 Ensembl ENCODE 0.4 -7.5 -7536 1.4 IKZF1 HES1 MBD2 BHLHE40 ARNT ZNF395 VEZF1 RUNX1 ZEB2 TAL1 RPL23AP37 RF00017-3212 LGALSL PELI1
GH02J064359 Enhancer 0.9 Ensembl ENCODE 0.4 -14.1 -14052 6 ZNF217 ZBTB7B ZIC2 REST MAX RXRA FOSL1 USF2 JUND CTCF ENSG00000238012 ENSG00000237217 LGALSL LGALSL-DT RF00017-3212 RPL23AP37 PELI1
GH02J064345 Enhancer 0.5 Ensembl 0.7 +2.3 2348 0.4 ETS1 THAP11 HCFC1 MAFF ZNF316 MAFK ZNF143 SIX5 LOC105374768 ENSG00000237217 LGALSL LGALSL-DT RPL23AP37 lnc-LGALSL-6 PELI1
GH02J064366 Enhancer 0.3 Ensembl 0.3 -20.1 -20051 2 USF1 ENSG00000238012 ENSG00000237217 LGALSL LGALSL-DT AFTPH RF00017-3212 RPL23AP37 PELI1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP37 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL23AP37 Gene

Latest Assembly
chr2:64,347,193-64,347,749
(GRCh38/hg38)
Size:
557 bases
Orientation:
Minus strand

Previous Assembly
chr2:64,574,352-64,574,883
(GRCh37/hg19 by Entrez Gene)
Size:
532 bases
Orientation:
Minus strand

chr2:64,574,327-64,574,875
(GRCh37/hg19 by Ensembl)
Size:
549 bases
Orientation:
Minus strand

Genomic View for RPL23AP37 Gene

Genes around RPL23AP37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP37 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP37 Gene

Proteins for RPL23AP37 Gene

Post-translational modifications for RPL23AP37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP37 Gene

Domains & Families for RPL23AP37 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP37 Gene

Function for RPL23AP37 Gene

Phenotypes From GWAS Catalog for RPL23AP37 Gene

Phenotypes for RPL23AP37 Gene

genes like me logo Genes that share phenotypes with RPL23AP37: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP37 Gene

Localization for RPL23AP37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP37 Gene

Pathways & Interactions for RPL23AP37 Gene

PathCards logo

SuperPathways for RPL23AP37 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL23AP37 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23AP37 Gene

Drugs & Compounds for RPL23AP37 Gene

No Compound Related Data Available

Transcripts for RPL23AP37 Gene

mRNA/cDNA for RPL23AP37 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP37 Gene

No ASD Table

Relevant External Links for RPL23AP37 Gene

GeneLoc Exon Structure for
RPL23AP37

Expression for RPL23AP37 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP37 Gene

genes like me logo Genes that share expression patterns with RPL23AP37: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP37 Gene

Orthologs for RPL23AP37 Gene

Evolution for RPL23AP37 Gene

ENSEMBL:
Gene Tree for RPL23AP37 (if available)
TreeFam:
Gene Tree for RPL23AP37 (if available)

No data available for Orthologs for RPL23AP37 Gene

Paralogs for RPL23AP37 Gene

No data available for Paralogs for RPL23AP37 Gene

Variants for RPL23AP37 Gene

Additional Variant Information for RPL23AP37 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP37

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP37 Gene

Disorders for RPL23AP37 Gene

Additional Disease Information for RPL23AP37

Genetic Association Database
(GAD)

No disorders were found for RPL23AP37 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP37 Gene

Publications for RPL23AP37 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genetic variants associated with breast size also influence breast cancer risk. (PMID: 22747683) Eriksson N … Tung JY (BMC medical genetics 2012) 3
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

No data available for Mastermind for RPL23AP37 Gene

Products for RPL23AP37 Gene

Sources for RPL23AP37 Gene