RPL23AP37 Gene (Pseudogene)

Ribosomal Protein L23a Pseudogene 37

GC02M064347
GIFtS:
7

Aliases for RPL23AP37 Gene

Aliases for RPL23AP37 Gene

  • Ribosomal Protein L23a Pseudogene 37 2 3 5
  • RPL23A_5_234 3

External Ids for RPL23AP37 Gene

Previous GeneCards Identifiers for RPL23AP37 Gene

  • GC02M064427
  • GC02M064575

Summaries for RPL23AP37 Gene

GeneCards Summary for RPL23AP37 Gene

RPL23AP37 (Ribosomal Protein L23a Pseudogene 37) is a Pseudogene.

Additional gene information for RPL23AP37 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP37 Gene

Genomics for RPL23AP37 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP37 Gene

Promoters and enhancers for RPL23AP37 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J064348 Enhancer 0.4 Ensembl 500.7 -1.2 -1156 1 EP300 FOSL1 FOS JUND POLR2A RPL23AP37 ENSG00000238201 ENSG00000228305 lnc-LGALSL-6 RF00017-3212
GH02J064354 Enhancer 1 Ensembl ENCODE 0.4 -7.6 -7555 1.4 PHB2 ZBTB11 TARDBP HES1 RUNX1 CTBP1 MYC HDAC3 NCOR1 MBD2 RPL23AP37 RF00017-3212
GH02J064345 Enhancer 0.5 Ensembl 0.7 +2.3 2344 0.4 HCFC1 ZNF316 MAFF MAFK ETS1 SIX5 THAP11 ZNF143 ENSG00000237217 LGALSL LGALSL-DT LOC105374768 RPL23AP37 lnc-LGALSL-6
GH02J064359 Enhancer 0.7 ENCODE 0.4 -12.4 -12444 1.9 ZNF217 CTCF FOS MYC ZBTB17 FOSL2 USF1 FOSL1 SIN3A MAFK LOC105374769 ENSG00000237217 LGALSL LGALSL-DT RPL23AP37 RF00017-3212
GH02J064361 Enhancer 0.6 ENCODE 0.4 -14.9 -14873 2.7 REST CTCF FOS RAD21 RXRA ZBTB7B HNF4A POLR2A JUND NR3C1 LOC105374769 ENSG00000237217 LGALSL LGALSL-DT RF00017-3212 RPL23AP37
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP37 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP37 Gene

Genomic Locations for RPL23AP37 Gene
chr2:64,347,193-64,347,745
(GRCh38/hg38)
Size:
553 bases
Orientation:
Minus strand
chr2:64,574,327-64,574,879
(GRCh37/hg19)
Size:
553 bases
Orientation:
Minus strand

Genomic View for RPL23AP37 Gene

Genes around RPL23AP37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP37 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL23AP37 Gene

Proteins for RPL23AP37 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL23AP37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP37 Gene

Domains & Families for RPL23AP37 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP37 Gene

Function for RPL23AP37 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPL23AP37 Gene

Phenotypes for RPL23AP37 Gene

GenomeRNAi human phenotypes for RPL23AP37:
genes like me logo Genes that share phenotypes with RPL23AP37: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP37 Gene

Localization for RPL23AP37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP37 Gene

Pathways & Interactions for RPL23AP37 Gene

PathCards logo

SuperPathways for RPL23AP37 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL23AP37 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23AP37 Gene

Drugs & Compounds for RPL23AP37 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL23AP37 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL23AP37 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP37 Gene

No ASD Table

Relevant External Links for RPL23AP37 Gene

GeneLoc Exon Structure for
RPL23AP37

Expression for RPL23AP37 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP37 Gene

mRNA expression in normal human tissues for RPL23AP37 Gene
mRNA expression by GTEx for RPL23AP37 Gene
genes like me logo Genes that share expression patterns with RPL23AP37: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP37 Gene

Orthologs for RPL23AP37 Gene

Evolution for RPL23AP37 Gene

ENSEMBL:
Gene Tree for RPL23AP37 (if available)
TreeFam:
Gene Tree for RPL23AP37 (if available)

No data available for Orthologs for RPL23AP37 Gene

Paralogs for RPL23AP37 Gene

No data available for Paralogs for RPL23AP37 Gene

Variants for RPL23AP37 Gene

Additional Variant Information for RPL23AP37 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP37

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP37 Gene

Disorders for RPL23AP37 Gene

Additional Disease Information for RPL23AP37

Genetic Association Database
(GAD)

No disorders were found for RPL23AP37 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP37 Gene

Publications for RPL23AP37 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Genetic variants associated with breast size also influence breast cancer risk. (PMID: 22747683) Eriksson N … Tung JY (BMC medical genetics 2012) 3 54
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41 54

No data available for Mastermind for RPL23AP37 Gene

Products for RPL23AP37 Gene

Sources for RPL23AP37 Gene