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Aliases for RPL23AP37 Gene
External Ids for RPL23AP37 Gene
- HGNC: 35664
- NCBI Entrez Gene: 130773
- Ensembl: ENSG00000236148
Previous GeneCards Identifiers for RPL23AP37 Gene
- GC02M064427
- GC02M064575
Summaries for RPL23AP37 Gene
GeneCards Summary for RPL23AP37 Gene
RPL23AP37 (Ribosomal Protein L23a Pseudogene 37) is a Pseudogene.
Additional gene information for RPL23AP37 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP37 Gene
Genomics for RPL23AP37 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL23AP37 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02J064348 | Enhancer | 0.4 | Ensembl | 250.7 | -1.2 | -1151 | 1 | FOSL1 JUND POLR2A | RPL23AP37 ENSG00000238201 PRELID1P6 lnc-LGALSL-6 RF00017-3212 LGALSL PELI1 | |
| GH02J064354 | Enhancer | 1 | Ensembl ENCODE | 0.4 | -7.5 | -7536 | 1.4 | IKZF1 HES1 MBD2 BHLHE40 ARNT ZNF395 VEZF1 RUNX1 ZEB2 TAL1 | RPL23AP37 RF00017-3212 LGALSL PELI1 | |
| GH02J064359 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | -14.1 | -14052 | 6 | ZNF217 ZBTB7B ZIC2 REST MAX RXRA FOSL1 USF2 JUND CTCF | ENSG00000238012 ENSG00000237217 LGALSL LGALSL-DT RF00017-3212 RPL23AP37 PELI1 | |
| GH02J064345 | Enhancer | 0.5 | Ensembl | 0.7 | +2.3 | 2348 | 0.4 | ETS1 THAP11 HCFC1 MAFF ZNF316 MAFK ZNF143 SIX5 | LOC105374768 ENSG00000237217 LGALSL LGALSL-DT RPL23AP37 lnc-LGALSL-6 PELI1 | |
| GH02J064366 | Enhancer | 0.3 | Ensembl | 0.3 | -20.1 | -20051 | 2 | USF1 | ENSG00000238012 ENSG00000237217 LGALSL LGALSL-DT AFTPH RF00017-3212 RPL23AP37 PELI1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL23AP37 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL23AP37 Gene
Latest Assembly
- chr2:64,347,193-64,347,749
- (GRCh38/hg38)
- Size:
- 557 bases
- Orientation:
- Minus strand
Previous Assembly
- chr2:64,574,352-64,574,883
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 532 bases
- Orientation:
- Minus strand
- chr2:64,574,327-64,574,875
- (GRCh37/hg19 by Ensembl)
- Size:
- 549 bases
- Orientation:
- Minus strand
Genomic View for RPL23AP37 Gene
Genes around RPL23AP37 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 2p14 by HGNC
- 2p14 by Entrez Gene
- 2p14 by Ensembl
RPL23AP37 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL23AP37 Gene
Proteins for RPL23AP37 Gene
Post-translational modifications for RPL23AP37 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23AP37
- Origene Custom Protein Services for RPL23AP37
Assay products for research
No data available for DME Specific Peptides for RPL23AP37 Gene
Domains & Families for RPL23AP37 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP37 Gene
Function for RPL23AP37 Gene
Phenotypes From GWAS Catalog for RPL23AP37 Gene
Phenotypes for RPL23AP37 Gene
- GenomeRNAi human phenotypes for RPL23AP37:
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL23AP37 - Starting at $85 >
- * RPL23AP37 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL23AP37
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP37 Gene
Localization for RPL23AP37 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP37 Gene
Transcripts for RPL23AP37 Gene
mRNA/cDNA for RPL23AP37 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000479658 549 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL23AP37 - Starting at $85 >
- * RPL23AP37 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL23AP37
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPL23AP37 Gene
- GeneLoc Exon Structure for
- RPL23AP37
Expression for RPL23AP37 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP37 Gene
Orthologs for RPL23AP37 Gene
No data available for Orthologs for RPL23AP37 Gene
Paralogs for RPL23AP37 Gene
No data available for Paralogs for RPL23AP37 Gene
Variants for RPL23AP37 Gene
Additional Variant Information for RPL23AP37 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL23AP37
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP37 Gene
Disorders for RPL23AP37 Gene
Additional Disease Information for RPL23AP37
- Genetic Association Database
- (GAD)
No disorders were found for RPL23AP37 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL23AP37 Gene
Publications for RPL23AP37 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Genetic variants associated with breast size also influence breast cancer risk. (PMID: 22747683) Eriksson N … Tung JY (BMC medical genetics 2012) 3
- A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41
No data available for Mastermind for RPL23AP37 Gene
Products for RPL23AP37 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL23AP37
- Origene Custom Protein Services for RPL23AP37
- Browse OriGene Inhibitory RNA Products For RPL23AP37
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL23AP37
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL23AP37
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL23AP37
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL23AP37
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL23AP37
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL23AP37
Sources for RPL23AP37 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB