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Aliases for RPL23AP26 Gene

Aliases for RPL23AP26 Gene

  • Ribosomal Protein L23a Pseudogene 26 2 3 5
  • RPL23A_14_334 3

External Ids for RPL23AP26 Gene

Previous GeneCards Identifiers for RPL23AP26 Gene

  • GC02P232159
  • GC02P232451

Summaries for RPL23AP26 Gene

GeneCards Summary for RPL23AP26 Gene

RPL23AP26 (Ribosomal Protein L23a Pseudogene 26) is a Pseudogene.

Additional gene information for RPL23AP26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP26 Gene

Genomics for RPL23AP26 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP26 Gene

Promoters and enhancers for RPL23AP26 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I231583 Enhancer 0.7 ENCODE dbSUPER 550.8 -1.5 -1495 1.2 SP1 BACH1 SIN3A ZSCAN29 GC02P231586 RPL23AP26 NMUR1 NCL RNU2-22P LINC00471 GC02P231560
GH02I231590 Enhancer 0.6 dbSUPER 0.8 +4.9 4932 1 SMARCE1 PKNOX1 KLF1 KLF17 SIN3A MNT ZNF217 CTBP1 POLR2A CREB1 NMUR1 GC02P231586 RPL23AP26 TEX44
GH02I231592 Promoter 0.7 EPDnew 0.4 +7.0 6981 0.1 CREB1 ZIC2 TEX44 GC02P231586 RPL23AP26
GH02I231571 Enhancer 0.7 ENCODE dbSUPER 0.4 -14.0 -14004 1.3 SP1 POLR2A TAL1 CBFA2T3 CBFA2T2 ZSCAN29 PRDM10 NMUR1 SNORA75 SNORD20 LINC00471 GC02P231560 GC02P231586 RPL23AP26
GH02I231573 Enhancer 0.5 ENCODE dbSUPER 0.4 -12.0 -12040 1.2 CTCF NMUR1 RNU2-22P NCL SNORA75 SNORD20 GC02P231560 GC02P231586 RPL23AP26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP26 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP26 Gene

Genomic Locations for RPL23AP26 Gene
chr2:231,585,864-231,590,927
(GRCh38/hg38)
Size:
5,064 bases
Orientation:
Plus strand
chr2:232,450,575-232,455,638
(GRCh37/hg19)

Genomic View for RPL23AP26 Gene

Genes around RPL23AP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP26 Gene

Proteins for RPL23AP26 Gene

Post-translational modifications for RPL23AP26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP26 Gene

Domains & Families for RPL23AP26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP26 Gene

Function for RPL23AP26 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP26 Gene

Localization for RPL23AP26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP26 Gene

Pathways & Interactions for RPL23AP26 Gene

SuperPathways for RPL23AP26 Gene

No Data Available

Interacting Proteins for RPL23AP26 Gene

Gene Ontology (GO) - Biological Process for RPL23AP26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP26 Gene

Drugs & Compounds for RPL23AP26 Gene

No Compound Related Data Available

Transcripts for RPL23AP26 Gene

mRNA/cDNA for RPL23AP26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP26 Gene

No ASD Table

Relevant External Links for RPL23AP26 Gene

GeneLoc Exon Structure for
RPL23AP26
ECgene alternative splicing isoforms for
RPL23AP26

Expression for RPL23AP26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP26 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP26 Gene

This gene is overexpressed in Testis (x40.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP26 Gene:

RPL23AP26
genes like me logo Genes that share expression patterns with RPL23AP26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP26 Gene

Orthologs for RPL23AP26 Gene

Evolution for RPL23AP26 Gene

ENSEMBL:
Gene Tree for RPL23AP26 (if available)
TreeFam:
Gene Tree for RPL23AP26 (if available)

No data available for Orthologs for RPL23AP26 Gene

Paralogs for RPL23AP26 Gene

No data available for Paralogs for RPL23AP26 Gene

Variants for RPL23AP26 Gene

Additional Variant Information for RPL23AP26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP26 Gene

Disorders for RPL23AP26 Gene

No disorders were found for RPL23AP26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP26 Gene

Publications for RPL23AP26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP26 Gene

Sources for RPL23AP26 Gene

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