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Aliases for RPL23AP19 Gene

Subcategory (RNA class) for RPL23AP19 Gene

lncRNA

Aliases for RPL23AP19 Gene

  • Ribosomal Protein L23a Pseudogene 19 2 3 5
  • RPL23A_2_8 3

External Ids for RPL23AP19 Gene

ORGUL Members for RPL23AP19 Gene

Previous GeneCards Identifiers for RPL23AP19 Gene

  • GC01P008801
  • GC01P008893

Summaries for RPL23AP19 Gene

GeneCards Summary for RPL23AP19 Gene

RPL23AP19 (Ribosomal Protein L23a Pseudogene 19) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL23AP19 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP19 Gene

Genomics for RPL23AP19 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP19 Gene

Promoters and enhancers for RPL23AP19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I008829 Enhancer 0.9 Ensembl ENCODE 550.8 -1.2 -1181 0.9 IRF2 MAX MZF1 EBF1 GATA3 ZNF366 ZBTB48 PRDM10 IKZF2 RUNX3 RPL23AP19 GPR157 ENSG00000221083 RERE
GH01I008847 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +17.5 17506 2.1 FOXA2 ARID4B SIN3A ZNF2 ZNF48 YY1 SLC30A9 CBX5 ARID2 ZNF143 ENO1 MIR6728 RPL23AP19
GH01I008821 Enhancer 1.2 Ensembl ENCODE 0.4 -8.2 -8245 2.1 PKNOX1 ZNF133 FEZF1 ZNF2 ZNF766 ZNF213 KLF7 ATF7 KLF13 SP5 GPR157 ENSG00000221083 RERE RPL23AP19
GH01I008856 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 +27.0 27034 3.3 HDGF HNRNPUL1 ATF1 PKNOX1 ZFP64 ARID4B ZNF2 TCF12 POLR2B GATA2 ENO1 ENO1-AS1 RNU6-304P LOC102724552 RERE MIR6728 RPL23AP19
GH01I008825 Enhancer 0.5 ENCODE 0.8 -4.8 -4780 1 L3MBTL2 ZNF341 MNT MGA ENO1 GPR157 ENSG00000221083 RPL23AP19 RERE
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP19 Gene

Genomic Locations for RPL23AP19 Gene
chr1:8,831,007-8,831,378
(GRCh38/hg38)
Size:
372 bases
Orientation:
Plus strand
chr1:8,891,066-8,891,437
(GRCh37/hg19)

Genomic View for RPL23AP19 Gene

Genes around RPL23AP19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP19 Gene

Proteins for RPL23AP19 Gene

Post-translational modifications for RPL23AP19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP19 Gene

Domains & Families for RPL23AP19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP19 Gene

Function for RPL23AP19 Gene

Phenotypes From GWAS Catalog for RPL23AP19 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP19 Gene

Localization for RPL23AP19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP19 Gene

Pathways & Interactions for RPL23AP19 Gene

SuperPathways for RPL23AP19 Gene

No Data Available

Interacting Proteins for RPL23AP19 Gene

Gene Ontology (GO) - Biological Process for RPL23AP19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP19 Gene

Drugs & Compounds for RPL23AP19 Gene

No Compound Related Data Available

Transcripts for RPL23AP19 Gene

mRNA/cDNA for RPL23AP19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP19 Gene

No ASD Table

Relevant External Links for RPL23AP19 Gene

GeneLoc Exon Structure for
RPL23AP19
ECgene alternative splicing isoforms for
RPL23AP19

Expression for RPL23AP19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP19 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP19 Gene:

RPL23AP19
genes like me logo Genes that share expression patterns with RPL23AP19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP19 Gene

Orthologs for RPL23AP19 Gene

Evolution for RPL23AP19 Gene

ENSEMBL:
Gene Tree for RPL23AP19 (if available)
TreeFam:
Gene Tree for RPL23AP19 (if available)

No data available for Orthologs for RPL23AP19 Gene

Paralogs for RPL23AP19 Gene

No data available for Paralogs for RPL23AP19 Gene

Variants for RPL23AP19 Gene

Additional Variant Information for RPL23AP19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP19 Gene

Disorders for RPL23AP19 Gene

No disorders were found for RPL23AP19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP19 Gene

Publications for RPL23AP19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP19 Gene

Sources for RPL23AP19 Gene

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