Aliases for RPL23AP18 Gene

Aliases for RPL23AP18 Gene

  • Ribosomal Protein L23a Pseudogene 18 2 3 5
  • RPL23A_3_161 3
  • RPL23AP18 5

External Ids for RPL23AP18 Gene

Previous GeneCards Identifiers for RPL23AP18 Gene

  • GC01M210550
  • GC01M212483

Summaries for RPL23AP18 Gene

GeneCards Summary for RPL23AP18 Gene

RPL23AP18 (Ribosomal Protein L23a Pseudogene 18) is a Pseudogene.

Additional gene information for RPL23AP18 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL23AP18 Gene

Genomics for RPL23AP18 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL23AP18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J212299 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.2 228 20.2 GATAD2A CTCF PRDM10 ZNF629 SOX13 PRDM1 REST RAD21 SP1 CEBPA RPL23AP18 LINC02608 PACC1 INTS7 PPP2R5A SNORA16B ENSG00000229832 DTL RPL21P28 ENSG00000212187
GH01J212297 Promoter 0.3 Ensembl 0.4 +11.8 11828 0.2 ENSG00000230063 PPP2R5A RPL23AP18 ENSG00000234915 PACC1
GH01J212300 Enhancer 0.2 Ensembl 0.4 +11.2 11228 0.2 ENSG00000230063 PPP2R5A RPL23AP18 ENSG00000234915 PACC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP18 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL23AP18 Gene

Genomic Locations for RPL23AP18 Gene
chr1:212,309,003-212,309,529
(GRCh38/hg38)
Size:
527 bases
Orientation:
Minus strand
chr1:212,482,393-212,482,860
(GRCh37/hg19)
Size:
468 bases
Orientation:
Minus strand

Genomic View for RPL23AP18 Gene

Genes around RPL23AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP18 Gene

Proteins for RPL23AP18 Gene

Post-translational modifications for RPL23AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP18 Gene

Domains & Families for RPL23AP18 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL23AP18 Gene

Function for RPL23AP18 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP18 Gene

Localization for RPL23AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP18 Gene

Pathways & Interactions for RPL23AP18 Gene

PathCards logo

SuperPathways for RPL23AP18 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL23AP18 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL23AP18 Gene

Drugs & Compounds for RPL23AP18 Gene

No Compound Related Data Available

Transcripts for RPL23AP18 Gene

mRNA/cDNA for RPL23AP18 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP18 Gene

No ASD Table

Relevant External Links for RPL23AP18 Gene

GeneLoc Exon Structure for
RPL23AP18

Expression for RPL23AP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL23AP18 Gene

genes like me logo Genes that share expression patterns with RPL23AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP18 Gene

Orthologs for RPL23AP18 Gene

Evolution for RPL23AP18 Gene

ENSEMBL:
Gene Tree for RPL23AP18 (if available)
TreeFam:
Gene Tree for RPL23AP18 (if available)

No data available for Orthologs for RPL23AP18 Gene

Paralogs for RPL23AP18 Gene

No data available for Paralogs for RPL23AP18 Gene

Variants for RPL23AP18 Gene

Additional Variant Information for RPL23AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP18 Gene

Disorders for RPL23AP18 Gene

No disorders were found for RPL23AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP18 Gene

Publications for RPL23AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL23AP18 Gene

Sources for RPL23AP18 Gene