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Aliases for RPL23AP11 Gene

Aliases for RPL23AP11 Gene

  • Ribosomal Protein L23a Pseudogene 11 2 3 5
  • RPL23A_29_1408 3

External Ids for RPL23AP11 Gene

Previous GeneCards Identifiers for RPL23AP11 Gene

  • GC14U900048
  • GC14M101118
  • GC14M102198
  • GC14M103129

Summaries for RPL23AP11 Gene

GeneCards Summary for RPL23AP11 Gene

RPL23AP11 (Ribosomal Protein L23a Pseudogene 11) is a Pseudogene.

Additional gene information for RPL23AP11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP11 Gene

Genomics for RPL23AP11 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP11 Gene

Promoters and enhancers for RPL23AP11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I102661 Enhancer 0.7 Ensembl ENCODE 550.8 -0.1 -70 2 ZNF121 ZFHX2 POLR2A POU5F1 EGR2 RPL23AP11 GC14M102663 TRAF3 RCOR1 LINC02323 ENSG00000202459
GH14I102664 Enhancer 0.4 Ensembl 550.8 -1.6 -1573 0.2 NFIC NFIB RPL23AP11 GC14M102663 RCOR1 TRAF3 ENSG00000202459
GH14I102682 Enhancer 1 Ensembl ENCODE 0.3 -21.3 -21311 2.3 HDAC1 ELF3 PKNOX1 FOXA2 DMAP1 RAD21 THRB ZNF48 YY1 EGR1 RCOR1 TRAF3 ENSG00000202459 RPL23AP11
GH14I102692 Enhancer 0.8 ENCODE 0.3 -28.4 -28351 0.2 HDAC1 ELF3 FOXA2 ARID4B DMAP1 RAD21 RARA THAP11 CEBPB KAT8 TRAF3 RCOR1 RNU6-1316P ENSG00000202459 RPL23AP11
GH14I102694 Enhancer 0.8 Ensembl ENCODE 0.3 -31.9 -31879 0.4 HDGF CTCF ZNF654 FOXA2 FOXA3 TRIM22 RAD21 ZNF121 SMC3 ZNF143 ENSG00000202459 RPL23AP11 RCOR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL23AP11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP11 Gene

Genomic Locations for RPL23AP11 Gene
chr14:102,662,193-102,662,728
(GRCh38/hg38)
Size:
536 bases
Orientation:
Minus strand
chr14:103,128,530-103,129,065
(GRCh37/hg19)

Genomic View for RPL23AP11 Gene

Genes around RPL23AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP11 Gene

Proteins for RPL23AP11 Gene

Post-translational modifications for RPL23AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP11 Gene

Domains & Families for RPL23AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP11 Gene

Function for RPL23AP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP11 Gene

Localization for RPL23AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP11 Gene

Pathways & Interactions for RPL23AP11 Gene

SuperPathways for RPL23AP11 Gene

No Data Available

Interacting Proteins for RPL23AP11 Gene

Gene Ontology (GO) - Biological Process for RPL23AP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP11 Gene

Drugs & Compounds for RPL23AP11 Gene

No Compound Related Data Available

Transcripts for RPL23AP11 Gene

mRNA/cDNA for RPL23AP11 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP11 Gene

No ASD Table

Relevant External Links for RPL23AP11 Gene

GeneLoc Exon Structure for
RPL23AP11
ECgene alternative splicing isoforms for
RPL23AP11

Expression for RPL23AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP11 Gene:

RPL23AP11
genes like me logo Genes that share expression patterns with RPL23AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP11 Gene

Orthologs for RPL23AP11 Gene

Evolution for RPL23AP11 Gene

ENSEMBL:
Gene Tree for RPL23AP11 (if available)
TreeFam:
Gene Tree for RPL23AP11 (if available)

No data available for Orthologs for RPL23AP11 Gene

Paralogs for RPL23AP11 Gene

No data available for Paralogs for RPL23AP11 Gene

Variants for RPL23AP11 Gene

Additional Variant Information for RPL23AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP11 Gene

Disorders for RPL23AP11 Gene

No disorders were found for RPL23AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP11 Gene

Publications for RPL23AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL23AP11 Gene

Sources for RPL23AP11 Gene

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