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Aliases for RPL23AP10 Gene

Aliases for RPL23AP10 Gene

  • Ribosomal Protein L23a Pseudogene 10 2 3 5
  • RPL23A_28_1405 3

External Ids for RPL23AP10 Gene

Previous GeneCards Identifiers for RPL23AP10 Gene

  • GC14U900047
  • GC14M094912
  • GC14M095992
  • GC14M096923

Summaries for RPL23AP10 Gene

GeneCards Summary for RPL23AP10 Gene

RPL23AP10 (Ribosomal Protein L23a Pseudogene 10) is a Pseudogene.

Additional gene information for RPL23AP10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL23AP10 Gene

Genomics for RPL23AP10 Gene

GeneHancer (GH) Regulatory Elements for RPL23AP10 Gene

Promoters and enhancers for RPL23AP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J096460 Enhancer 1.1 Ensembl ENCODE 0.7 -5.0 -4973 2.9 SP1 ELF3 CEBPG TFE3 PPARG ZNF644 KAT8 HMG20B RXRA SOX13 PAPOLA ATG2B GSKIP RPL23AP10 AK7
GH14J096467 Enhancer 0.9 Ensembl ENCODE 0.4 -11.5 -11482 2.1 TFE3 SP1 RXRA CEBPA GATAD2A RXRB SOX13 JUND SAP130 TEAD1 GSKIP RPL23AP10 PAPOLA AK7
GH14J096486 Enhancer 0.5 Ensembl 0.3 -29.6 -29647 2.2 EBF1 ATF2 ZMYM3 ZNF24 ENSG00000260806 PAPOLA RPL23AP10 AK7
GH14J096479 Enhancer 0.4 ENCODE 0.3 -22.6 -22626 0.2 FOXA2 CREB1 PAPOLA RPL23AP10 AK7
GH14J096497 Enhancer 0.5 ENCODE 0.3 -40.7 -40687 1 PKNOX1 IKZF2 CBFB EGR1 RUNX3 PAPOLA RPL23AP10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL23AP10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL23AP10 Gene

Genomic Locations for RPL23AP10 Gene
chr14:96,456,529-96,457,053
(GRCh38/hg38)
Size:
525 bases
Orientation:
Minus strand
chr14:96,922,866-96,923,390
(GRCh37/hg19)
Size:
525 bases
Orientation:
Minus strand

Genomic View for RPL23AP10 Gene

Genes around RPL23AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL23AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL23AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL23AP10 Gene

Proteins for RPL23AP10 Gene

Post-translational modifications for RPL23AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL23AP10 Gene

Domains & Families for RPL23AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL23AP10 Gene

Function for RPL23AP10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL23AP10 Gene

Localization for RPL23AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL23AP10 Gene

Pathways & Interactions for RPL23AP10 Gene

PathCards logo

SuperPathways for RPL23AP10 Gene

No Data Available

Interacting Proteins for RPL23AP10 Gene

Gene Ontology (GO) - Biological Process for RPL23AP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL23AP10 Gene

Drugs & Compounds for RPL23AP10 Gene

No Compound Related Data Available

Transcripts for RPL23AP10 Gene

mRNA/cDNA for RPL23AP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL23AP10 Gene

No ASD Table

Relevant External Links for RPL23AP10 Gene

GeneLoc Exon Structure for
RPL23AP10
ECgene alternative splicing isoforms for
RPL23AP10

Expression for RPL23AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL23AP10 Gene

mRNA differential expression in normal tissues according to GTEx for RPL23AP10 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x6.1) and Skin - Not Sun Exposed (Suprapubic) (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL23AP10 Gene:

RPL23AP10
genes like me logo Genes that share expression patterns with RPL23AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL23AP10 Gene

Orthologs for RPL23AP10 Gene

Evolution for RPL23AP10 Gene

ENSEMBL:
Gene Tree for RPL23AP10 (if available)
TreeFam:
Gene Tree for RPL23AP10 (if available)

No data available for Orthologs for RPL23AP10 Gene

Paralogs for RPL23AP10 Gene

No data available for Paralogs for RPL23AP10 Gene

Variants for RPL23AP10 Gene

Additional Variant Information for RPL23AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL23AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL23AP10 Gene

Disorders for RPL23AP10 Gene

No disorders were found for RPL23AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL23AP10 Gene

Publications for RPL23AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

No data available for External Links for RPL23AP10 Gene

Products for RPL23AP10 Gene

Sources for RPL23AP10 Gene

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