Aliases for RPL22P19 Gene

Aliases for RPL22P19 Gene

  • Ribosomal Protein L22 Pseudogene 19 2 3 5
  • RPL22_8_1294 3

External Ids for RPL22P19 Gene

Previous GeneCards Identifiers for RPL22P19 Gene

  • GC12M123986
  • GC12M125421

Summaries for RPL22P19 Gene

GeneCards Summary for RPL22P19 Gene

RPL22P19 (Ribosomal Protein L22 Pseudogene 19) is a Pseudogene.

Additional gene information for RPL22P19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL22P19 Gene

Genomics for RPL22P19 Gene

GeneHancer (GH) Regulatory Elements for RPL22P19 Gene

Promoters and enhancers for RPL22P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J124938 Enhancer 0.8 ENCODE 500.7 -0.4 -415 0.2 TOE1 SKI TRIM25 ZBTB26 ZNF316 NCOR1 ZNF592 PBX2 BCOR SMAD4 RPL22P19 AB330774-008
GH12J124933 Enhancer 0.5 Ensembl dbSUPER 500.7 +2.0 1994 0.2 BHLHE40 ZNF384 RPL22P19 lnc-UBC-3
GH12J124936 Enhancer 0.4 ENCODE dbSUPER 500.7 -1.0 -982 0.1 ATF3 RPL22P19 AB330774-008
GH12J124937 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -3.6 -3622 5 RXRA ZBTB40 ZNF217 EP300 CTCF ZSCAN5C SIN3A NRF1 TCF12 POLR2G UBC AB330774-008 TRA-TGC4-1 TRD-GTC2-10 piR-38621 piR-36225-002 ENSG00000270130 DHX37 ENSG00000269938 NCOR2
GH12J124932 Enhancer 0.2 Ensembl 0.7 +3.3 3294 1.2 RPL22P19 lnc-UBC-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL22P19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL22P19 Gene

Genomic Locations for RPL22P19 Gene
chr12:124,935,455-124,935,895
(GRCh38/hg38)
Size:
441 bases
Orientation:
Minus strand
chr12:125,420,001-125,420,441
(GRCh37/hg19)
Size:
441 bases
Orientation:
Minus strand

Genomic View for RPL22P19 Gene

Genes around RPL22P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL22P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL22P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL22P19 Gene

Proteins for RPL22P19 Gene

Post-translational modifications for RPL22P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL22P19 Gene

Domains & Families for RPL22P19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL22P19 Gene

Function for RPL22P19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL22P19 Gene

Localization for RPL22P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL22P19 Gene

Pathways & Interactions for RPL22P19 Gene

PathCards logo

SuperPathways for RPL22P19 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL22P19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL22P19 Gene

Drugs & Compounds for RPL22P19 Gene

No Compound Related Data Available

Transcripts for RPL22P19 Gene

mRNA/cDNA for RPL22P19 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL22P19 Gene

No ASD Table

Relevant External Links for RPL22P19 Gene

GeneLoc Exon Structure for
RPL22P19

Expression for RPL22P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL22P19 Gene

mRNA differential expression in normal tissues according to GTEx for RPL22P19 Gene

This gene is overexpressed in Brain - Cerebellum (x4.4).
genes like me logo Genes that share expression patterns with RPL22P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL22P19 Gene

Orthologs for RPL22P19 Gene

Evolution for RPL22P19 Gene

ENSEMBL:
Gene Tree for RPL22P19 (if available)
TreeFam:
Gene Tree for RPL22P19 (if available)

No data available for Orthologs for RPL22P19 Gene

Paralogs for RPL22P19 Gene

No data available for Paralogs for RPL22P19 Gene

Variants for RPL22P19 Gene

Additional Variant Information for RPL22P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL22P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL22P19 Gene

Disorders for RPL22P19 Gene

No disorders were found for RPL22P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL22P19 Gene

Publications for RPL22P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL22P19 Gene

Sources for RPL22P19 Gene