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RPL21P99 Gene(Pseudogene)

Ribosomal Protein L21 Pseudogene 99

GCID:
GC12M029658
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPL21P99 Gene

Aliases for RPL21P99 Gene

  • Ribosomal Protein L21 Pseudogene 99 2 3 5
  • RPL21_41_1222 3

External Ids for RPL21P99 Gene

Previous GeneCards Identifiers for RPL21P99 Gene

  • GC12U901096
  • GC12M029812

Summaries for RPL21P99 Gene

GeneCards Summary for RPL21P99 Gene

RPL21P99 (Ribosomal Protein L21 Pseudogene 99) is a Pseudogene.

Additional gene information for RPL21P99 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P99 Gene

Genomics for RPL21P99 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL21P99 Gene

Promoters and enhancers for RPL21P99 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12I029691 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -32.6 -32621 0.9 PKNOX1 SMAD1 EBF1 ELF1 DPF2 BCL11A IKZF1 POU5F1 NBN IKZF2 TMTC1 GC12P029725 RPL21P99
GH12I029713 Enhancer 0.8 Ensembl ENCODE 0.2 -54.5 -54461 0.6 SCRT1 NFYA ZSCAN4 MAX CEBPB EP300 ATF2 ZKSCAN1 ZNF335 PRDM6 GC12P029725 RPL21P99 TMTC1
GH12I029709 Enhancer 0.7 Ensembl ENCODE 0.2 -51.5 -51503 1.1 RCOR1 FEZF1 CHD2 EZH2 GC12P029725 RPL21P99 TMTC1
GH12I029706 Enhancer 0.2 FANTOM5 0.2 -48.3 -48297 0.4 GC12P029725 RPL21P99 TMTC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P99 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P99 Gene

Genomic Locations for RPL21P99 Gene
chr12:29,658,341-29,658,840
(GRCh38/hg38)
Size:
500 bases
Orientation:
Minus strand
chr12:29,811,274-29,811,773
(GRCh37/hg19)

Genomic View for RPL21P99 Gene

Genes around RPL21P99 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P99 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P99 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL21P99 Gene

Proteins for RPL21P99 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL21P99 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P99 Gene

Domains & Families for RPL21P99 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P99 Gene

Function for RPL21P99 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P99 Gene

Localization for RPL21P99 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P99 Gene

Pathways & Interactions for RPL21P99 Gene

SuperPathways for RPL21P99 Gene

PathCards logo More details on SuperPathways for RPL21P99
No Data Available

Interacting Proteins for RPL21P99 Gene

Gene Ontology (GO) - Biological Process for RPL21P99 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P99 Gene

Drugs & Compounds for RPL21P99 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL21P99 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL21P99 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P99 Gene

No ASD Table

Relevant External Links for RPL21P99 Gene

GeneLoc Exon Structure for
RPL21P99
ECgene alternative splicing isoforms for
RPL21P99

Expression for RPL21P99 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P99 Gene

mRNA expression in normal human tissues for RPL21P99 Gene
mRNA expression by GTEx for RPL21P99 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P99 Gene:

RPL21P99
genes like me logo Genes that share expression patterns with RPL21P99: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P99 Gene

Orthologs for RPL21P99 Gene

Evolution for RPL21P99 Gene

ENSEMBL:
Gene Tree for RPL21P99 (if available)
TreeFam:
Gene Tree for RPL21P99 (if available)

No data available for Orthologs for RPL21P99 Gene

Paralogs for RPL21P99 Gene

No data available for Paralogs for RPL21P99 Gene

Variants for RPL21P99 Gene

Additional Variant Information for RPL21P99 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P99

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P99 Gene

Disorders for RPL21P99 Gene

Additional Disease Information for RPL21P99

Genetic Association Database
(GAD)

No disorders were found for RPL21P99 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P99 Gene

Publications for RPL21P99 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Association of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium. (PMID: 20445134) Smith NL … Vasan RS (Circulation. Cardiovascular genetics 2010) 44 58
  3. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 44 58
  4. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58

Products for RPL21P99 Gene

Sources for RPL21P99 Gene

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