Aliases for RPL21P99 Gene

Aliases for RPL21P99 Gene

  • Ribosomal Protein L21 Pseudogene 99 2 3 5
  • RPL21_41_1222 3
  • RPL21P99 5

External Ids for RPL21P99 Gene

Previous GeneCards Identifiers for RPL21P99 Gene

  • GC12U901096
  • GC12M029812

Summaries for RPL21P99 Gene

GeneCards Summary for RPL21P99 Gene

RPL21P99 (Ribosomal Protein L21 Pseudogene 99) is a Pseudogene.

Additional gene information for RPL21P99 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P99 Gene

Genomics for RPL21P99 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL21P99 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J029662 Enhancer 0.3 Ensembl 0.7 -4.3 -4261 0.6 HNF4A RXRA RPL21P99 RF00017-1120 TMTC1 OVCH1
GH12J029666 Enhancer 0.3 Ensembl 0.4 -8.8 -8761 1.6 NR2C1 NR2F1 TMTC1 RPL21P99 RF00017-1120 OVCH1
GH12J029681 Enhancer 0.4 Ensembl 0.4 -22.8 -22767 0.4 ZNF316 MAFK EMSY TMTC1 RF00017-1120 RPL21P99 OVCH1
GH12J029673 Enhancer 0.3 Ensembl 0.4 -14.5 -14461 0.2 POLR2A TMTC1 RPL21P99 RF00017-1120 OVCH1
GH12J029672 Enhancer 0.2 Ensembl 0.4 -14.0 -13961 0.4 TMTC1 RPL21P99 RF00017-1120 OVCH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL21P99 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL21P99 Gene

Genomic Locations for RPL21P99 Gene
chr12:29,658,341-29,658,840
(GRCh38/hg38)
Size:
500 bases
Orientation:
Minus strand
chr12:29,811,274-29,811,773
(GRCh37/hg19)
Size:
500 bases
Orientation:
Minus strand

Genomic View for RPL21P99 Gene

Genes around RPL21P99 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P99 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P99 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P99 Gene

Proteins for RPL21P99 Gene

Post-translational modifications for RPL21P99 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P99 Gene

Domains & Families for RPL21P99 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P99 Gene

Function for RPL21P99 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P99 Gene

Localization for RPL21P99 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P99 Gene

Pathways & Interactions for RPL21P99 Gene

PathCards logo

SuperPathways for RPL21P99 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL21P99 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL21P99 Gene

Drugs & Compounds for RPL21P99 Gene

No Compound Related Data Available

Transcripts for RPL21P99 Gene

mRNA/cDNA for RPL21P99 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P99 Gene

No ASD Table

Relevant External Links for RPL21P99 Gene

GeneLoc Exon Structure for
RPL21P99

Expression for RPL21P99 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P99 Gene

genes like me logo Genes that share expression patterns with RPL21P99: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P99 Gene

Orthologs for RPL21P99 Gene

Evolution for RPL21P99 Gene

ENSEMBL:
Gene Tree for RPL21P99 (if available)
TreeFam:
Gene Tree for RPL21P99 (if available)

No data available for Orthologs for RPL21P99 Gene

Paralogs for RPL21P99 Gene

No data available for Paralogs for RPL21P99 Gene

Variants for RPL21P99 Gene

Additional Variant Information for RPL21P99 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P99

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P99 Gene

Disorders for RPL21P99 Gene

Additional Disease Information for RPL21P99

Genetic Association Database
(GAD)

No disorders were found for RPL21P99 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P99 Gene

Publications for RPL21P99 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Association of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium. (PMID: 20445134) Smith NL … Vasan RS (Circulation. Cardiovascular genetics 2010) 41
  3. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 41
  4. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 41
  5. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41

No data available for Mastermind for RPL21P99 Gene

Products for RPL21P99 Gene

Sources for RPL21P99 Gene