Aliases for RPL21P98 Gene

Aliases for RPL21P98 Gene

  • Ribosomal Protein L21 Pseudogene 98 2 3
  • Ribosomal Protein L21 (RPL21) Pseudogene 5
  • RPL21_47_1259 3
  • AC107032.1 5

External Ids for RPL21P98 Gene

Previous GeneCards Identifiers for RPL21P98 Gene

  • GC12P075579
  • GC12P077055

Summaries for RPL21P98 Gene

GeneCards Summary for RPL21P98 Gene

RPL21P98 (Ribosomal Protein L21 Pseudogene 98) is a Pseudogene.

Additional gene information for RPL21P98 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P98 Gene

Genomics for RPL21P98 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL21P98 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J075683 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.2 -975.5 -975459 3.4 JUND ZNF24 ZNF740 ZBTB44 GTF2E2 ZNF766 CEBPB NFE2 E2F5 NR2C2 KRR1 RPL21P98 RPL10P13 LOC107984533 ENSG00000286259 ENSG00000258077 LOC105369844 PHLDA1
GH12J076143 Enhancer 0.9 Ensembl ENCODE 10.3 -516.1 -516064 2.6 ZNF692 ZNF776 ZSCAN4 ZNF148 KLF9 RELB EGR1 CTBP1 RUNX3 FOXK2 ENSG00000257941 KRR1 GLIPR1L1 CAPS2 ZDHHC17 BBS10 RPL21P98 RF00026-256 piR-61240-077 NAP1L1
GH12J076302 Enhancer 0.9 ENCODE dbSUPER 10.3 -356.8 -356822 2.4 RFX1 ZNF740 ZSCAN29 HMBOX1 GABPA MEF2D GTF2A2 RELA ZNF592 STAT1 lnc-BBS10-4 KRR1 RPL21P98 LNCOG CSRP2 LINC02407 BBS10 NAP1L1
GH12J076636 Enhancer 1 Ensembl ENCODE 0.4 -23.6 -23564 2.8 CREB1 ZNF629 IKZF1 ZNF692 PRDM1 MTA2 PKNOX1 POLR2A PATZ1 DPF2 RF00017-1191 OSBPL8 ZDHHC17 RPL21P98 LOC105369851
GH12J076649 Enhancer 0.3 Ensembl 0.4 -11.2 -11164 0.4 JUN RPL21P98 RF00017-1191 LOC105369851 OSBPL8 ZDHHC17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL21P98 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL21P98 Gene

Genomic Locations for RPL21P98 Gene
chr12:76,660,365-76,660,928
(GRCh38/hg38)
Size:
564 bases
Orientation:
Plus strand
chr12:77,054,145-77,054,708
(GRCh37/hg19)
Size:
564 bases
Orientation:
Plus strand

Genomic View for RPL21P98 Gene

Genes around RPL21P98 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P98 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P98 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P98 Gene

Proteins for RPL21P98 Gene

Post-translational modifications for RPL21P98 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P98 Gene

Domains & Families for RPL21P98 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P98 Gene

Function for RPL21P98 Gene

Phenotypes From GWAS Catalog for RPL21P98 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P98 Gene

Localization for RPL21P98 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P98 Gene

Pathways & Interactions for RPL21P98 Gene

PathCards logo

SuperPathways for RPL21P98 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL21P98 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL21P98 Gene

Drugs & Compounds for RPL21P98 Gene

No Compound Related Data Available

Transcripts for RPL21P98 Gene

mRNA/cDNA for RPL21P98 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P98 Gene

No ASD Table

Relevant External Links for RPL21P98 Gene

GeneLoc Exon Structure for
RPL21P98

Expression for RPL21P98 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P98 Gene

genes like me logo Genes that share expression patterns with RPL21P98: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P98 Gene

Orthologs for RPL21P98 Gene

Evolution for RPL21P98 Gene

ENSEMBL:
Gene Tree for RPL21P98 (if available)
TreeFam:
Gene Tree for RPL21P98 (if available)

No data available for Orthologs for RPL21P98 Gene

Paralogs for RPL21P98 Gene

No data available for Paralogs for RPL21P98 Gene

Variants for RPL21P98 Gene

Additional Variant Information for RPL21P98 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P98

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P98 Gene

Disorders for RPL21P98 Gene

No disorders were found for RPL21P98 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P98 Gene

Publications for RPL21P98 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL21P98 Gene

Sources for RPL21P98 Gene