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Aliases for RPL21P93 Gene

Aliases for RPL21P93 Gene

  • Ribosomal Protein L21 Pseudogene 93 2 3 5
  • RPL21_36_1027 3

External Ids for RPL21P93 Gene

Previous GeneCards Identifiers for RPL21P93 Gene

  • GC10M029231
  • GC10M029282
  • GC10M029360
  • GC10M029432
  • GC10M029606

Summaries for RPL21P93 Gene

GeneCards Summary for RPL21P93 Gene

RPL21P93 (Ribosomal Protein L21 Pseudogene 93) is a Pseudogene.

Additional gene information for RPL21P93 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P93 Gene

Genomics for RPL21P93 Gene

GeneHancer (GH) Regulatory Elements for RPL21P93 Gene

Promoters and enhancers for RPL21P93 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I028838 Enhancer 1.2 Ensembl ENCODE 5.7 +59.9 59896 2.1 PKNOX1 SMAD1 FOXA2 ARNT FEZF1 CBX5 FOS REST ZNF592 MEF2D GC10M030003 RNU6-270P RPL21P93 C10orf126
GH10I028884 Enhancer 0.7 ENCODE 0.4 +15.0 15017 0.2 SOX13 FOXA2 SIN3A RARA GATA3 RERE FOSL2 NR2F6 FOS CREM C10orf126 LYZL1 GC10M029847 RNA5SP308 RPL21P93 GC10M029999
GH10I028890 Enhancer 0.6 ENCODE 0.4 +8.7 8653 1.5 SRF SMAD5 CEBPB CEBPG RAD21 FOSL1 ZNF24 ZBTB33 SPI1 C10orf126 RNU6-270P RPL21P93 GC10M029999 GC10M029847 RNA5SP308
GH10I028875 Enhancer 0.8 Ensembl ENCODE 0.3 +23.7 23734 0.7 SOX13 SP5 ZIC2 RARA TEAD3 SCRT2 CEBPA TCF7 BCL6 GC10M029847 RNA5SP308 C10orf126 RNU6-270P RPL21P93 GC10M029999
GH10I028892 Enhancer 0.5 ENCODE 0.4 +6.5 6477 0.2 FOSL1 NFIC GATA3 ZEB2 ZBTB40 GC10M029999 RPL21P93 RNA5SP308 GC10M029847
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P93 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P93 Gene

Genomic Locations for RPL21P93 Gene
chr10:28,898,950-28,899,524
(GRCh38/hg38)
Size:
575 bases
Orientation:
Minus strand
chr10:29,187,879-29,188,453
(GRCh37/hg19)

Genomic View for RPL21P93 Gene

Genes around RPL21P93 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P93 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P93 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P93 Gene

Proteins for RPL21P93 Gene

Post-translational modifications for RPL21P93 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P93 Gene

Domains & Families for RPL21P93 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P93 Gene

Function for RPL21P93 Gene

Phenotypes From GWAS Catalog for RPL21P93 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P93 Gene

Localization for RPL21P93 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P93 Gene

Pathways & Interactions for RPL21P93 Gene

SuperPathways for RPL21P93 Gene

No Data Available

Interacting Proteins for RPL21P93 Gene

Gene Ontology (GO) - Biological Process for RPL21P93 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P93 Gene

Drugs & Compounds for RPL21P93 Gene

No Compound Related Data Available

Transcripts for RPL21P93 Gene

mRNA/cDNA for RPL21P93 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P93 Gene

No ASD Table

Relevant External Links for RPL21P93 Gene

GeneLoc Exon Structure for
RPL21P93
ECgene alternative splicing isoforms for
RPL21P93

Expression for RPL21P93 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P93 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P93 Gene:

RPL21P93
genes like me logo Genes that share expression patterns with RPL21P93: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P93 Gene

Orthologs for RPL21P93 Gene

Evolution for RPL21P93 Gene

ENSEMBL:
Gene Tree for RPL21P93 (if available)
TreeFam:
Gene Tree for RPL21P93 (if available)

No data available for Orthologs for RPL21P93 Gene

Paralogs for RPL21P93 Gene

No data available for Paralogs for RPL21P93 Gene

Variants for RPL21P93 Gene

Additional Variant Information for RPL21P93 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P93

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P93 Gene

Disorders for RPL21P93 Gene

Additional Disease Information for RPL21P93

Genetic Association Database
(GAD)

No disorders were found for RPL21P93 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P93 Gene

Publications for RPL21P93 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study of DSM-IV cannabis dependence. (PMID: 21668797) Agrawal A … Bierut LJ (Addiction biology 2011) 44 58
  3. Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies. (PMID: 20038947) Shyn SI … Hamilton SP (Molecular psychiatry 2011) 44 58
  4. Genome-wide association identifies the ABO blood group as a major locus associated with serum levels of soluble E-selectin. (PMID: 19729612) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Arteriosclerosis, thrombosis, and vascular biology 2009) 44 58

Products for RPL21P93 Gene

Sources for RPL21P93 Gene

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