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Aliases for RPL21P83 Gene

Aliases for RPL21P83 Gene

  • Ribosomal Protein L21 Pseudogene 83 2 3
  • RPL21_31_978 3
  • AL158156.1 5

External Ids for RPL21P83 Gene

Previous GeneCards Identifiers for RPL21P83 Gene

  • GC09U901226
  • GC09M037491
  • GC09M037492

Summaries for RPL21P83 Gene

GeneCards Summary for RPL21P83 Gene

RPL21P83 (Ribosomal Protein L21 Pseudogene 83) is a Pseudogene.

Additional gene information for RPL21P83 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P83 Gene

Genomics for RPL21P83 Gene

GeneHancer (GH) Regulatory Elements for RPL21P83 Gene

Promoters and enhancers for RPL21P83 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I037485 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 44.7 +4.1 4132 3.5 HDGF FOXA2 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B POLR1E RPL21P83 ZCCHC7 EXOSC3 ZBTB5 FBXO10 ENSG00000234160 DCAF10 ENSG00000256966 TOMM5
GH09I037463 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 15.2 +24.7 24668 5.8 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 ZBTB5 DCAF10 EXOSC3 ZCCHC7 RPL21P83 RNF38 TRMT10B GRHPR TMX2P1 POLR1E
GH09I037501 Enhancer 0.7 ENCODE 44.3 -12.5 -12548 3.8 MAX RAD21 RARA YY1 POLR2A RXRA HLF GABPA NR2F2 NFIL3 PIR31469 PIR55770 PIR42939 RPL21P83 POLR1E FBXO10 ZBTB5
GH09I037799 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.1 -310.2 -310196 2.9 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 EXOSC3 DCAF10 TRMT10B ZBTB5 ZCCHC7 POLR1E SLC25A51 TMX2P1 RPL21P83 ENSG00000255872
GH09I037564 Enhancer 0.8 Ensembl ENCODE 17.9 -75.1 -75091 2.4 CBFB CHD1 JUNB EBF1 YBX1 ATF2 POLR2A IKZF1 ZNF143 RUNX3 GC09M037564 RPL21P83 FRMPD1 POLR1E FBXO10 PIR31436 ENSG00000256966
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P83 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P83 Gene

Genomic Locations for RPL21P83 Gene
chr9:37,490,389-37,490,933
(GRCh38/hg38)
Size:
545 bases
Orientation:
Minus strand
chr9:37,490,386-37,490,930
(GRCh37/hg19)

Genomic View for RPL21P83 Gene

Genes around RPL21P83 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P83 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P83 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P83 Gene

Proteins for RPL21P83 Gene

Post-translational modifications for RPL21P83 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P83 Gene

Domains & Families for RPL21P83 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P83 Gene

Function for RPL21P83 Gene

Phenotypes From GWAS Catalog for RPL21P83 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P83 Gene

Localization for RPL21P83 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P83 Gene

Pathways & Interactions for RPL21P83 Gene

SuperPathways for RPL21P83 Gene

No Data Available

Interacting Proteins for RPL21P83 Gene

Gene Ontology (GO) - Biological Process for RPL21P83 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P83 Gene

Drugs & Compounds for RPL21P83 Gene

No Compound Related Data Available

Transcripts for RPL21P83 Gene

mRNA/cDNA for RPL21P83 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P83 Gene

No ASD Table

Relevant External Links for RPL21P83 Gene

GeneLoc Exon Structure for
RPL21P83
ECgene alternative splicing isoforms for
RPL21P83

Expression for RPL21P83 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P83 Gene

mRNA differential expression in normal tissues according to GTEx for RPL21P83 Gene

This gene is overexpressed in Liver (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL21P83 Gene:

RPL21P83
genes like me logo Genes that share expression patterns with RPL21P83: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P83 Gene

Orthologs for RPL21P83 Gene

Evolution for RPL21P83 Gene

ENSEMBL:
Gene Tree for RPL21P83 (if available)
TreeFam:
Gene Tree for RPL21P83 (if available)

No data available for Orthologs for RPL21P83 Gene

Paralogs for RPL21P83 Gene

No data available for Paralogs for RPL21P83 Gene

Variants for RPL21P83 Gene

Additional Variant Information for RPL21P83 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P83

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P83 Gene

Disorders for RPL21P83 Gene

No disorders were found for RPL21P83 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P83 Gene

Publications for RPL21P83 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL21P83 Gene

Sources for RPL21P83 Gene

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