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Aliases for RPL21P28 Gene

Aliases for RPL21P28 Gene

  • Ribosomal Protein L21 Pseudogene 28 2 3 5
  • RPL21_8_160 3

External Ids for RPL21P28 Gene

Previous GeneCards Identifiers for RPL21P28 Gene

  • GC01M210294
  • GC01M212225
  • GC01M182901

Summaries for RPL21P28 Gene

GeneCards Summary for RPL21P28 Gene

RPL21P28 (Ribosomal Protein L21 Pseudogene 28) is a Pseudogene.

Additional gene information for RPL21P28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P28 Gene

Genomics for RPL21P28 Gene

GeneHancer (GH) Regulatory Elements for RPL21P28 Gene

Promoters and enhancers for RPL21P28 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I212789 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 20 -739.5 -739546 4.4 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 TATDN3 NSL1 FLVCR1 FLVCR1-AS1 ANGEL2 RPL21P28 ENSG00000235182 RPS28P2 VASH2 BATF3
GH01I212033 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.8 +15.8 15822 4.6 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC MEF2D GLIS1 INTS7 DTL RCOR3 RPL21P28 ANGEL2 LOC91548 NEK2 LPGAT1
GH01I211674 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 +376.4 376448 2.3 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC LOC91548 NEK2 RCOR3 SNX25P1 RPL21P28 DTL INTS7 SLC30A1 FDPSP8
GH01I211256 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.1 +792.9 792902 5.1 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC RCOR3 LOC105372902 LINC00467 HHAT RPL21P28
GH01I212481 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -433.9 -433866 8.2 PKNOX1 SMAD1 FOXA2 ARNT NEUROD1 SIN3A FEZF1 ZNF2 ZNF766 FOS LOC105372907 ATF3 ANGEL2 BATF3 RPL21P28 LOC105372908
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P28 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the RPL21P28 gene promoter:

Genomic Locations for RPL21P28 Gene

Genomic Locations for RPL21P28 Gene
566 bases
Minus strand

Genomic View for RPL21P28 Gene

Genes around RPL21P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P28 Gene

Proteins for RPL21P28 Gene

Post-translational modifications for RPL21P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P28 Gene

Domains & Families for RPL21P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P28 Gene

Function for RPL21P28 Gene

Phenotypes From GWAS Catalog for RPL21P28 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P28 Gene

Localization for RPL21P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P28 Gene

Pathways & Interactions for RPL21P28 Gene

SuperPathways for RPL21P28 Gene

No Data Available

Interacting Proteins for RPL21P28 Gene

Gene Ontology (GO) - Biological Process for RPL21P28 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL21P28 Gene

Drugs & Compounds for RPL21P28 Gene

No Compound Related Data Available

Transcripts for RPL21P28 Gene

mRNA/cDNA for RPL21P28 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL21P28 Gene

Ribosomal protein L21 pseudogene 28:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P28 Gene

No ASD Table

Relevant External Links for RPL21P28 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL21P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P28 Gene:


SOURCE GeneReport for Unigene cluster for RPL21P28 Gene:

genes like me logo Genes that share expression patterns with RPL21P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P28 Gene

Orthologs for RPL21P28 Gene

Evolution for RPL21P28 Gene

Gene Tree for RPL21P28 (if available)
Gene Tree for RPL21P28 (if available)

No data available for Orthologs for RPL21P28 Gene

Paralogs for RPL21P28 Gene

No data available for Paralogs for RPL21P28 Gene

Variants for RPL21P28 Gene

Sequence variations from dbSNP and Humsavar for RPL21P28 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000084737 -- 212,052,736(-) A/G upstream_transcript_variant
rs1000987910 -- 212,053,588(-) TTGTTGTTGTTGTTGTT/TTGTTGTTGTTGTT/TTGTTGTTGTTGTTGTTGTT upstream_transcript_variant
rs1002768272 -- 212,051,855(-) C/A non_coding_transcript_variant
rs1003607113 -- 212,053,128(-) A/G upstream_transcript_variant
rs1003837055 -- 212,053,463(-) G/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RPL21P28 Gene

Variant ID Type Subtype PubMed ID
nsv4432 CNV insertion 18451855
nsv506979 OTHER sequence alteration 20534489
nsv945281 CNV duplication 23825009

Additional Variant Information for RPL21P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL21P28 Gene

Disorders for RPL21P28 Gene

Additional Disease Information for RPL21P28

No disorders were found for RPL21P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P28 Gene

Publications for RPL21P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Chromosome 6p22 locus associated with clinically aggressive neuroblastoma. (PMID: 18463370) Maris JM … Hakonarson H (The New England journal of medicine 2008) 44 58
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  4. Genome-wide association of sleep and circadian phenotypes. (PMID: 17903308) Gottlieb DJ … Wilk JB (BMC medical genetics 2007) 44 58

Products for RPL21P28 Gene

Sources for RPL21P28 Gene

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