RPL21P21 Gene (Pseudogene)

Ribosomal Protein L21 Pseudogene 21

GC01M010054
GIFtS:
6

Aliases for RPL21P21 Gene

Aliases for RPL21P21 Gene

  • Ribosomal Protein L21 Pseudogene 21 2 3
  • Pseudogene Similar To Part Of Ribosomal Protein L21 (RPL21) 5
  • RPL21_1_11 3
  • AL590639.1 5

External Ids for RPL21P21 Gene

Previous GeneCards Identifiers for RPL21P21 Gene

  • GC01U902340
  • GC01M010115

Summaries for RPL21P21 Gene

GeneCards Summary for RPL21P21 Gene

RPL21P21 (Ribosomal Protein L21 Pseudogene 21) is a Pseudogene.

Additional gene information for RPL21P21 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P21 Gene

Genomics for RPL21P21 Gene

GeneHancer (GH) Regulatory Elements for RPL21P21 Gene

Promoters and enhancers for RPL21P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J010055 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 500.7 -1.5 -1470 1.8 TEAD4 ZNF639 FOXA1 CTBP1 TEAD1 TBX3 FOXA2 ZNF316 CEBPB ZBTB17 RPL21P21 lnc-LZIC-2 KIF1B PGAM1P11 UBE4B
GH01J010057 Enhancer 0.6 ENCODE dbSUPER 0.7 -2.9 -2945 0.4 FOS ZIC2 JUND ZNF362 PGAM1P11 RPL21P21 UBE4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL21P21 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P21 Gene

Genomic Locations for RPL21P21 Gene
chr1:10,054,440-10,054,782
(GRCh38/hg38)
Size:
343 bases
Orientation:
Minus strand
chr1:10,114,498-10,114,840
(GRCh37/hg19)
Size:
343 bases
Orientation:
Minus strand

Genomic View for RPL21P21 Gene

Genes around RPL21P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P21 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL21P21 Gene

Proteins for RPL21P21 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL21P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P21 Gene

Domains & Families for RPL21P21 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P21 Gene

Function for RPL21P21 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P21 Gene

Localization for RPL21P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P21 Gene

Pathways & Interactions for RPL21P21 Gene

PathCards logo

SuperPathways for RPL21P21 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL21P21 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL21P21 Gene

Drugs & Compounds for RPL21P21 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL21P21 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL21P21 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P21 Gene

No ASD Table

Relevant External Links for RPL21P21 Gene

GeneLoc Exon Structure for
RPL21P21

Expression for RPL21P21 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P21 Gene

mRNA expression in normal human tissues for RPL21P21 Gene
mRNA expression by GTEx for RPL21P21 Gene
genes like me logo Genes that share expression patterns with RPL21P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P21 Gene

Orthologs for RPL21P21 Gene

Evolution for RPL21P21 Gene

ENSEMBL:
Gene Tree for RPL21P21 (if available)
TreeFam:
Gene Tree for RPL21P21 (if available)

No data available for Orthologs for RPL21P21 Gene

Paralogs for RPL21P21 Gene

No data available for Paralogs for RPL21P21 Gene

Variants for RPL21P21 Gene

Additional Variant Information for RPL21P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P21 Gene

Disorders for RPL21P21 Gene

No disorders were found for RPL21P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P21 Gene

Publications for RPL21P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL21P21 Gene

Products for RPL21P21 Gene

Sources for RPL21P21 Gene