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Aliases for RPL21P21 Gene
Aliases for RPL21P21 Gene
External Ids for RPL21P21 Gene
- HGNC: 35728
- Entrez Gene: 100270877
- Ensembl: ENSG00000224340
Previous GeneCards Identifiers for RPL21P21 Gene
- GC01U902340
- GC01M010115
Summaries for RPL21P21 Gene
GeneCards Summary for RPL21P21 Gene
RPL21P21 (Ribosomal Protein L21 Pseudogene 21) is a Pseudogene.
Additional gene information for RPL21P21 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P21 Gene
Genomics for RPL21P21 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL21P21 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J010055 | Promoter/Enhancer | 1.3 | Ensembl ENCODE dbSUPER | 600.7 | -1.5 | -1471 | 1.8 | CEBPG GATAD2A ATF7 TEAD4 PRDM10 ZNF629 ZNF692 RCOR2 FOXA1 PKNOX1 | RPL21P21 lnc-LZIC-2 KIF1B PGAM1P11 UBE4B | |
| GH01J010031 | Promoter/Enhancer | 2.4 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.4 | +21.2 | 21151 | 4.7 | SP1 HNRNPL CTCF PRDM10 ZNF629 TFE3 RFX1 LEF1 IKZF1 RFX5 | UBE4B TARDBP LZIC GPR157 CASZ1 ENSG00000271895 KIF1B RBP7 PGD piR-33124 | |
| GH01J010045 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 0.4 | +8.3 | 8280 | 3.8 | ZNF24 HDAC1 ZNF341 FOXJ2 TCF12 MGA USF2 NFE2 FOXK2 ZNF585B | LZIC TARDBP DFFA NMNAT1 KIF1B RPL21P21 lnc-LZIC-2 UBE4B | |
| GH01J010057 | Enhancer | 0.6 | ENCODE dbSUPER | 0.7 | -2.9 | -2946 | 0.4 | ZIC2 FOS JUND ZNF362 | PGAM1P11 RPL21P21 lnc-LZIC-2 UBE4B KIF1B | |
| GH01J010050 | Enhancer | 0.4 | Ensembl dbSUPER | 0.7 | +2.5 | 2480 | 0.2 | ZNF121 | RPL21P21 lnc-LZIC-2 UBE4B KIF1B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL21P21 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL21P21 Gene
Genomic Locations for RPL21P21 Gene
- chr1:10,054,412-10,054,781
- (GRCh38/hg38)
- Size:
- 370 bases
- Orientation:
- Minus strand
- chr1:10,114,498-10,114,840
- (GRCh37/hg19)
- Size:
- 343 bases
- Orientation:
- Minus strand
Genomic View for RPL21P21 Gene
Genes around RPL21P21 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p36.3 by HGNC
- 1p36.22 by Entrez Gene
- 1p36.22 by Ensembl
RPL21P21 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL21P21 Gene
Proteins for RPL21P21 Gene
Post-translational modifications for RPL21P21 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL21P21
- Origene Custom Protein Services for RPL21P21
No data available for DME Specific Peptides for RPL21P21 Gene
Domains & Families for RPL21P21 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P21 Gene
Function for RPL21P21 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL21P21 - Select products 50% OFF >
- * RPL21P21 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL21P21
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P21 Gene
Localization for RPL21P21 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P21 Gene
Transcripts for RPL21P21 Gene
mRNA/cDNA for RPL21P21 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000456484 337 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL21P21 - Select products 50% OFF >
- * RPL21P21 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL21P21
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL21P21 Gene
- GeneLoc Exon Structure for
- RPL21P21
Expression for RPL21P21 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P21 Gene
Orthologs for RPL21P21 Gene
No data available for Orthologs for RPL21P21 Gene
Paralogs for RPL21P21 Gene
No data available for Paralogs for RPL21P21 Gene
Variants for RPL21P21 Gene
Additional Variant Information for RPL21P21 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL21P21
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P21 Gene
Disorders for RPL21P21 Gene
No disorders were found for RPL21P21 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P21 Gene
Publications for RPL21P21 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPL21P21 Gene
Products for RPL21P21 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL21P21
- Origene Custom Protein Services for RPL21P21
- Browse OriGene Inhibitory RNA Products For RPL21P21
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL21P21
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL21P21
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL21P21
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL21P21
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL21P21
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL21P21
Sources for RPL21P21 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB