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Aliases for RPL21P2 Gene

Aliases for RPL21P2 Gene

  • Ribosomal Protein L21 Pseudogene 2 2 3 5
  • RPL21_65_1679 3
  • BA352D3.1 3

External Ids for RPL21P2 Gene

Previous GeneCards Identifiers for RPL21P2 Gene

  • GC20U990126
  • GC20M003988

Summaries for RPL21P2 Gene

GeneCards Summary for RPL21P2 Gene

RPL21P2 (Ribosomal Protein L21 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL21P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P2 Gene

Genomics for RPL21P2 Gene

GeneHancer (GH) Regulatory Elements for RPL21P2 Gene

Promoters and enhancers for RPL21P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I004059 Enhancer 0.9 Ensembl ENCODE dbSUPER 550.8 -0.3 -254 1.6 POLR2A L3MBTL2 MAX EBF1 BATF MYC RUNX3 RPL21P2 RNF24 ENSG00000229539 ENSG00000205300
GH20I004081 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 13.3 -23.7 -23713 5 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 RPL21P2 PANK2 SMOX ENSG00000229539 CDC25B CENPB SPEF1 RNF24 ENSG00000205300
GH20I004089 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 13.2 -30.9 -30852 2.5 PKNOX1 ARID4B DNMT3B RAD21 TCF12 ZNF143 FOS EGR2 KLF11 NFYC RPL21P2 CDC25B CENPB RNF24 PANK2 ENSG00000205300 SMOX
GH20I004025 Enhancer 1.2 Ensembl ENCODE dbSUPER 13 +33.5 33546 2.9 HDGF HDAC1 PKNOX1 RAD21 TCF12 CBX5 SCRT2 SMARCA5 ZNF280D CEBPB RPL21P2 ENSG00000205300 FTLP3
GH20I004021 Enhancer 1 Ensembl ENCODE dbSUPER 12.5 +37.6 37608 1.9 CTCF HLF CEBPB ZMYM3 REST POLR2A IKZF1 ZFP36 MLLT1 FTLP3 ENSG00000229539 PANK2 RPL21P2 ENSG00000205300 AP5S1 SPEF1 RNF24
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P2 Gene

Genomic Locations for RPL21P2 Gene
chr20:4,059,601-4,060,152
(GRCh38/hg38)
Size:
552 bases
Orientation:
Minus strand
chr20:4,040,248-4,040,799
(GRCh37/hg19)

Genomic View for RPL21P2 Gene

Genes around RPL21P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P2 Gene

Proteins for RPL21P2 Gene

Post-translational modifications for RPL21P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P2 Gene

Domains & Families for RPL21P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P2 Gene

Function for RPL21P2 Gene

Phenotypes From GWAS Catalog for RPL21P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P2 Gene

Localization for RPL21P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P2 Gene

Pathways & Interactions for RPL21P2 Gene

SuperPathways for RPL21P2 Gene

No Data Available

Interacting Proteins for RPL21P2 Gene

Gene Ontology (GO) - Biological Process for RPL21P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P2 Gene

Drugs & Compounds for RPL21P2 Gene

No Compound Related Data Available

Transcripts for RPL21P2 Gene

mRNA/cDNA for RPL21P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P2 Gene

No ASD Table

Relevant External Links for RPL21P2 Gene

GeneLoc Exon Structure for
RPL21P2
ECgene alternative splicing isoforms for
RPL21P2

Expression for RPL21P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P2 Gene:

RPL21P2
genes like me logo Genes that share expression patterns with RPL21P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P2 Gene

Orthologs for RPL21P2 Gene

Evolution for RPL21P2 Gene

ENSEMBL:
Gene Tree for RPL21P2 (if available)
TreeFam:
Gene Tree for RPL21P2 (if available)

No data available for Orthologs for RPL21P2 Gene

Paralogs for RPL21P2 Gene

No data available for Paralogs for RPL21P2 Gene

Variants for RPL21P2 Gene

Additional Variant Information for RPL21P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P2 Gene

Disorders for RPL21P2 Gene

Additional Disease Information for RPL21P2

Genetic Association Database
(GAD)

No disorders were found for RPL21P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P2 Gene

Publications for RPL21P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H … Hirschhorn JN (Nature 2010) 44 58

Products for RPL21P2 Gene

Sources for RPL21P2 Gene

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