Aliases for RPL21P135 Gene

Aliases for RPL21P135 Gene

  • Ribosomal Protein L21 Pseudogene 135 2 3 5
  • RPL21P135 5

External Ids for RPL21P135 Gene

Previous GeneCards Identifiers for RPL21P135 Gene

  • GC03P037791
  • GC03P037750
  • GC03P037752

Summaries for RPL21P135 Gene

GeneCards Summary for RPL21P135 Gene

RPL21P135 (Ribosomal Protein L21 Pseudogene 135) is a Pseudogene.

Additional gene information for RPL21P135 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P135 Gene

Genomics for RPL21P135 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL21P135 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J037745 Enhancer 0.4 CraniofacialAtlas 0.7 -2.5 -2461 0.6 POLR2A RFX5 SMARCA4 RPL21P135 piR-60885-077 CTDSPL ITGA9-AS1 ITGA9
GH03J037712 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -35.1 -35070 4 SPI1 ETV6 RPL21P135 piR-60885-077 CTDSPL ITGA9-AS1 ITGA9
GH03J037738 Enhancer 0.5 Ensembl 0.4 -8.2 -8171 1 ZNF629 ZIC2 TCF7L2 NR2F2 ZFHX2 FEZF1 EGR2 ITGA9 RNU7-73P RPL21P135 piR-60885-077 ITGA9-AS1 CTDSPL
GH03J037694 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.2 -53.5 -53470 3.2 CTCF FOXA1 TCF7L2 SPI1 EZH2 CTBP1 SP7 PKNOX1 RNU7-73P piR-60885-077 RPL21P135 CTDSPL ITGA9-AS1 ITGA9
GH03J037735 Enhancer 0.5 Ensembl 0.4 -11.2 -11171 0.2 TCF12 IKZF2 DPF2 IKZF1 NR2F1 SPI1 RPL21P135 piR-60885-077 ITGA9-AS1 CTDSPL ITGA9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL21P135 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL21P135 Gene

Genomic Locations for RPL21P135 Gene
chr3:37,748,071-37,748,935
(GRCh38/hg38)
Size:
865 bases
Orientation:
Plus strand
chr3:37,789,562-37,790,426
(GRCh37/hg19)
Size:
865 bases
Orientation:
Plus strand

Genomic View for RPL21P135 Gene

Genes around RPL21P135 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P135 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P135 Gene

Proteins for RPL21P135 Gene

Post-translational modifications for RPL21P135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P135 Gene

Domains & Families for RPL21P135 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P135 Gene

Function for RPL21P135 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P135 Gene

Localization for RPL21P135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P135 Gene

Pathways & Interactions for RPL21P135 Gene

PathCards logo

SuperPathways for RPL21P135 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL21P135 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL21P135 Gene

Drugs & Compounds for RPL21P135 Gene

No Compound Related Data Available

Transcripts for RPL21P135 Gene

mRNA/cDNA for RPL21P135 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P135 Gene

No ASD Table

Relevant External Links for RPL21P135 Gene

GeneLoc Exon Structure for
RPL21P135

Expression for RPL21P135 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL21P135 Gene

genes like me logo Genes that share expression patterns with RPL21P135: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P135 Gene

Orthologs for RPL21P135 Gene

Evolution for RPL21P135 Gene

ENSEMBL:
Gene Tree for RPL21P135 (if available)
TreeFam:
Gene Tree for RPL21P135 (if available)

No data available for Orthologs for RPL21P135 Gene

Paralogs for RPL21P135 Gene

No data available for Paralogs for RPL21P135 Gene

Variants for RPL21P135 Gene

Additional Variant Information for RPL21P135 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P135

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P135 Gene

Disorders for RPL21P135 Gene

No disorders were found for RPL21P135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P135 Gene

Publications for RPL21P135 Gene

No publications were found for RPL21P135 Gene.

No data available for Mastermind for RPL21P135 Gene

Products for RPL21P135 Gene

Sources for RPL21P135 Gene