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Aliases for RPL21P126 Gene
External Ids for RPL21P126 Gene
- HGNC: 35959
- NCBI Entrez Gene: 100271449
- Ensembl: ENSG00000242320
Previous GeneCards Identifiers for RPL21P126 Gene
- GC18U900487
- GC18P053304
Summaries for RPL21P126 Gene
GeneCards Summary for RPL21P126 Gene
RPL21P126 (Ribosomal Protein L21 Pseudogene 126) is a Pseudogene.
Additional gene information for RPL21P126 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL21P126 Gene
Genomics for RPL21P126 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL21P126 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J055634 | Enhancer | 0.6 | Ensembl ENCODE | 250.7 | -1.2 | -1193 | 0.4 | CEBPG CEBPB FOS | NONHSAG023912.2 RPL21P126 TCF4 lnc-RAB27B-9 ENSG00000267284 CCDC68 | |
| GH18J055635 | Promoter | 0.3 | EPDnew | 250.7 | +0.2 | 180 | 0.1 | NONHSAG023912.2 RPL21P126 TCF4 ENSG00000267284 CCDC68 | ||
| GH18J055636 | Enhancer | 0.3 | Ensembl | 250.7 | -0.7 | -693 | 0.2 | CEBPB | NONHSAG023912.2 RPL21P126 TCF4 lnc-RAB27B-9 ENSG00000267284 CCDC68 | |
| GH18J055581 | Promoter/Enhancer | 2.4 | EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER | 11.8 | -50.0 | -50008 | 9.6 | ZSCAN16 TBP ZBTB10 MNT IKZF1 SMAD5 ETS1 POLR2A ZEB1 ZNF610 | TCF4 5MWI_A-079 RPL21P126 LINC01929 LINC01415 ENSG00000267284 LOC105372126 lnc-CCDC68-2 CCDC68 | |
| GH18J055577 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 11.7 | -56.9 | -56893 | 2.6 | FEZF1 CTCF REST RXRA ZNF843 ZNF316 PRDM6 ATF1 MAFK MAFG | RPL21P126 TCF4 5MWI_A-079 lnc-CCDC68-2 CCDC68 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL21P126 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL21P126 Gene
Latest Assembly
- chr18:55,635,794-55,636,346
- (GRCh38/hg38)
- Size:
- 553 bases
- Orientation:
- Plus strand
Previous Assembly
- chr18:53,303,025-53,303,577
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 553 bases
- Orientation:
- Plus strand
- chr18:53,303,064-53,303,541
- (GRCh37/hg19 by Ensembl)
- Size:
- 478 bases
- Orientation:
- Plus strand
Genomic View for RPL21P126 Gene
Genes around RPL21P126 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q21.2 by HGNC
- 18q21.2 by Entrez Gene
- 18q21.2 by Ensembl
RPL21P126 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL21P126 Gene
Proteins for RPL21P126 Gene
Post-translational modifications for RPL21P126 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL21P126
- Origene Custom Protein Services for RPL21P126
Assay products for research
No data available for DME Specific Peptides for RPL21P126 Gene
Domains & Families for RPL21P126 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL21P126 Gene
Function for RPL21P126 Gene
Phenotypes From GWAS Catalog for RPL21P126 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL21P126 - Starting at $85 >
- * RPL21P126 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL21P126
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P126 Gene
Localization for RPL21P126 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P126 Gene
Transcripts for RPL21P126 Gene
mRNA/cDNA for RPL21P126 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000470049 478 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL21P126 - Starting at $85 >
- * RPL21P126 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL21P126
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPL21P126 Gene
- GeneLoc Exon Structure for
- RPL21P126
Expression for RPL21P126 Gene
mRNA differential expression in normal tissues according to GTEx for RPL21P126 Gene
This gene is overexpressed in Testis (x49.4).
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P126 Gene
Orthologs for RPL21P126 Gene
No data available for Orthologs for RPL21P126 Gene
Paralogs for RPL21P126 Gene
No data available for Paralogs for RPL21P126 Gene
Variants for RPL21P126 Gene
Additional Variant Information for RPL21P126 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL21P126
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P126 Gene
Disorders for RPL21P126 Gene
Additional Disease Information for RPL21P126
- Genetic Association Database
- (GAD)
No disorders were found for RPL21P126 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL21P126 Gene
Publications for RPL21P126 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Common human genetic variants and HIV-1 susceptibility: a genome-wide survey in a homogeneous African population. (PMID: 21160409) Petrovski S … Center for HIV/AIDS Vaccine Immunology (AIDS (London, England) 2011) 41
- Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41
- A second-generation genomewide screen for asthma-susceptibility alleles in a founder population. (PMID: 11022011) Ober C … Cox NJ (American journal of human genetics 2000) 41
No data available for Mastermind for RPL21P126 Gene
Products for RPL21P126 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL21P126
- Origene Custom Protein Services for RPL21P126
- Browse OriGene Inhibitory RNA Products For RPL21P126
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL21P126
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL21P126
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL21P126
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL21P126
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL21P126
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL21P126
Sources for RPL21P126 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB