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Aliases for RPL21P125 Gene

Aliases for RPL21P125 Gene

  • Ribosomal Protein L21 Pseudogene 125 2 3
  • RPL21_55_1506 3
  • AC132942.1 5

External Ids for RPL21P125 Gene

Previous GeneCards Identifiers for RPL21P125 Gene

  • GC17P003516
  • GC17P003569
  • GC17P003575
  • GC17P003577
  • GC17P003581
  • GC17P003586

Summaries for RPL21P125 Gene

GeneCards Summary for RPL21P125 Gene

RPL21P125 (Ribosomal Protein L21 Pseudogene 125) is a Pseudogene.

Additional gene information for RPL21P125 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P125 Gene

Genomics for RPL21P125 Gene

GeneHancer (GH) Regulatory Elements for RPL21P125 Gene

Promoters and enhancers for RPL21P125 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I003664 Enhancer 0.4 dbSUPER 550.8 -0.5 -505 1.2 ZFHX2 EGR2 GC17P003666 GC17P003667 GC17P003669 RPL21P125 TAX1BP3 CTNS P2RX5 HASPIN LOC105371492 P2RX5-TAX1BP3
GH17I002975 Enhancer 1.4 Ensembl ENCODE dbSUPER 12 -689.5 -689479 1.3 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF213 KLF13 METTL16 LOC105371492 RN7SL608P RPL21P125 SMG6 ENSG00000262692 HNRNPA1P16 HIC1 CTNS RAP1GAP2
GH17I002924 Enhancer 1.3 Ensembl ENCODE dbSUPER 12 -739.7 -739659 2.6 INSM2 KLF17 ZNF76 GLI4 ZNF366 ATF7 KLF13 EGR2 ZNF114 YY2 METTL16 HNRNPA1P16 LOC105371492 SMG6 RN7SL608P ENSG00000263050 DPH1 RPL21P125 ENSG00000262692 HIC1
GH17I003665 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.8 +2.8 2750 4.2 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B TAX1BP3 EMC6 CTNS P2RX5 HASPIN RPL21P125 P2RX5-TAX1BP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P125 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P125 Gene

Genomic Locations for RPL21P125 Gene
chr17:3,665,177-3,665,740
(GRCh38/hg38)
Size:
564 bases
Orientation:
Plus strand
chr17:3,568,471-3,569,034
(GRCh37/hg19)

Genomic View for RPL21P125 Gene

Genes around RPL21P125 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P125 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P125 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P125 Gene

Proteins for RPL21P125 Gene

Post-translational modifications for RPL21P125 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P125 Gene

Domains & Families for RPL21P125 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P125 Gene

Function for RPL21P125 Gene

Phenotypes From GWAS Catalog for RPL21P125 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P125 Gene

Localization for RPL21P125 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P125 Gene

Pathways & Interactions for RPL21P125 Gene

SuperPathways for RPL21P125 Gene

No Data Available

Interacting Proteins for RPL21P125 Gene

Gene Ontology (GO) - Biological Process for RPL21P125 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P125 Gene

Drugs & Compounds for RPL21P125 Gene

No Compound Related Data Available

Transcripts for RPL21P125 Gene

mRNA/cDNA for RPL21P125 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P125 Gene

No ASD Table

Relevant External Links for RPL21P125 Gene

GeneLoc Exon Structure for
RPL21P125
ECgene alternative splicing isoforms for
RPL21P125

Expression for RPL21P125 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P125 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P125 Gene:

RPL21P125
genes like me logo Genes that share expression patterns with RPL21P125: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P125 Gene

Orthologs for RPL21P125 Gene

Evolution for RPL21P125 Gene

ENSEMBL:
Gene Tree for RPL21P125 (if available)
TreeFam:
Gene Tree for RPL21P125 (if available)

No data available for Orthologs for RPL21P125 Gene

Paralogs for RPL21P125 Gene

No data available for Paralogs for RPL21P125 Gene

Variants for RPL21P125 Gene

Additional Variant Information for RPL21P125 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P125

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P125 Gene

Disorders for RPL21P125 Gene

No disorders were found for RPL21P125 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P125 Gene

Publications for RPL21P125 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL21P125 Gene

Sources for RPL21P125 Gene

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