Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL21P11 Gene

Aliases for RPL21P11 Gene

  • Ribosomal Protein L21 Pseudogene 11 2 3 5
  • RPL21_50_1399 3

External Ids for RPL21P11 Gene

Previous GeneCards Identifiers for RPL21P11 Gene

  • GC14M084648
  • GC14U900175
  • GC14M088824
  • GC14M088825
  • GC14M089902
  • GC14M090832
  • GC14M090483
  • GC14M090491
  • GC14M090598
  • GC14M090604
  • GC14M090835
  • GC14M091106
  • GC14M091404

Summaries for RPL21P11 Gene

GeneCards Summary for RPL21P11 Gene

RPL21P11 (Ribosomal Protein L21 Pseudogene 11) is a Pseudogene.

Additional gene information for RPL21P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL21P11 Gene

Genomics for RPL21P11 Gene

GeneHancer (GH) Regulatory Elements for RPL21P11 Gene

Promoters and enhancers for RPL21P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I091058 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.5 -694.0 -694046 6.3 HDGF PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 RPS6KA5 DGLUCY PPP4R3A NRDE2 TRIP11 RPS18P2 RNU7-30P RPL21P11 SNORA11B CCDC88C
GH14I091077 Enhancer 0.9 ENCODE 30.6 -711.1 -711121 1 ZNF529 ZFP64 BATF IRF4 ZNF121 ZNF213 ATF7 ETV6 BCLAF1 IKZF2 NRDE2 PPP4R3A TRIP11 RPS18P2 RPL21P11 RPS6KA5 RNU7-30P DGLUCY
GH14I091112 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.9 -749.9 -749908 8.4 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 POLR2B DGLUCY TRIP11 PPP4R3A NRDE2 RNU7-30P ATXN3 RPS6KA5 RPS18P2 RPL21P11 GC14P091127
GH14I090696 Enhancer 1.1 Ensembl ENCODE 12.5 -330.5 -330541 3.4 SIN3A FEZF1 ZNF213 ZNF143 DEK REST TSHZ1 ZNF518A ATF4 GLIS1 LOC105370622 NRDE2 RPL21P11 CALM1 PPP4R3A TTC7B GC14M092128
GH14I089909 Enhancer 1.4 FANTOM5 Ensembl ENCODE 9.7 +455.6 455554 4.1 PKNOX1 FOXA2 ZNF2 ZNF213 ATF7 FOS TSHZ1 REST PPARG NFIL3 NRDE2 RPL21P11 TDP1 EFCAB11 FOXN3 KCNK13 RAB42P1 ENSG00000259053
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL21P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL21P11 Gene

Genomic Locations for RPL21P11 Gene
chr14:90,366,635-90,367,222
(GRCh38/hg38)
Size:
588 bases
Orientation:
Minus strand
chr14:90,832,979-90,833,566
(GRCh37/hg19)

Genomic View for RPL21P11 Gene

Genes around RPL21P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL21P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL21P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL21P11 Gene

Proteins for RPL21P11 Gene

Post-translational modifications for RPL21P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL21P11 Gene

Domains & Families for RPL21P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL21P11 Gene

Function for RPL21P11 Gene

Phenotypes From GWAS Catalog for RPL21P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL21P11 Gene

Localization for RPL21P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL21P11 Gene

Pathways & Interactions for RPL21P11 Gene

SuperPathways for RPL21P11 Gene

No Data Available

Interacting Proteins for RPL21P11 Gene

Gene Ontology (GO) - Biological Process for RPL21P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL21P11 Gene

Drugs & Compounds for RPL21P11 Gene

No Compound Related Data Available

Transcripts for RPL21P11 Gene

mRNA/cDNA for RPL21P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL21P11 Gene

No ASD Table

Relevant External Links for RPL21P11 Gene

GeneLoc Exon Structure for
RPL21P11
ECgene alternative splicing isoforms for
RPL21P11

Expression for RPL21P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL21P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL21P11 Gene:

RPL21P11
genes like me logo Genes that share expression patterns with RPL21P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL21P11 Gene

Orthologs for RPL21P11 Gene

Evolution for RPL21P11 Gene

ENSEMBL:
Gene Tree for RPL21P11 (if available)
TreeFam:
Gene Tree for RPL21P11 (if available)

No data available for Orthologs for RPL21P11 Gene

Paralogs for RPL21P11 Gene

No data available for Paralogs for RPL21P11 Gene

Variants for RPL21P11 Gene

Additional Variant Information for RPL21P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL21P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL21P11 Gene

Disorders for RPL21P11 Gene

No disorders were found for RPL21P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL21P11 Gene

Publications for RPL21P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL21P11 Gene

Sources for RPL21P11 Gene

Content
Loading form....