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Aliases for RPL19P6 Gene

Aliases for RPL19P6 Gene

  • Ribosomal Protein L19 Pseudogene 6 2 3
  • RPL19_2_411 3
  • AC133435.1 5

External Ids for RPL19P6 Gene

Previous GeneCards Identifiers for RPL19P6 Gene

  • GC03U901214
  • GC03M141763

Summaries for RPL19P6 Gene

GeneCards Summary for RPL19P6 Gene

RPL19P6 (Ribosomal Protein L19 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL19P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL19P6 Gene

Genomics for RPL19P6 Gene

GeneHancer (GH) Regulatory Elements for RPL19P6 Gene

Promoters and enhancers for RPL19P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I142044 Enhancer 0.2 dbSUPER 550.8 -0.7 -720 0.7 RPL19P6 RNU6-425P ATP1B3 TFDP2 GC03P142146
GH03I141538 Enhancer 0.5 dbSUPER 6 +503.4 503398 4.7 CTCF ZNF316 MAFG HMBOX1 CEBPB NFE2 EMSY RASA2 RPL19P6 ZBTB38 RASA2-IT1 GC03M141600
GH03I141494 Enhancer 0.2 dbSUPER 6 +548.9 548902 1.1 RPL19P6 RASA2 RASA2-IT1
GH03I142045 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 -2.5 -2531 2.4 SMAD1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 NCOA1 ZNF592 RNU6-425P ATP1B3 RPL19P6 GC03P142146 TFDP2
GH03I142026 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 +16.0 15985 3.9 PKNOX1 SIN3A FEZF1 YY1 TCF12 POLR2B ZNF766 RUNX3 NCOA1 REST TFDP2 RNU6-425P GK5 ATP1B3 RPL19P6 PIR46950
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL19P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL19P6 Gene

Genomic Locations for RPL19P6 Gene
chr3:142,043,544-142,044,225
(GRCh38/hg38)
Size:
682 bases
Orientation:
Minus strand
chr3:141,762,386-141,763,067
(GRCh37/hg19)

Genomic View for RPL19P6 Gene

Genes around RPL19P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL19P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL19P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL19P6 Gene

Proteins for RPL19P6 Gene

Post-translational modifications for RPL19P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL19P6 Gene

Domains & Families for RPL19P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL19P6 Gene

Function for RPL19P6 Gene

Phenotypes From GWAS Catalog for RPL19P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL19P6 Gene

Localization for RPL19P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL19P6 Gene

Pathways & Interactions for RPL19P6 Gene

SuperPathways for RPL19P6 Gene

No Data Available

Interacting Proteins for RPL19P6 Gene

Gene Ontology (GO) - Biological Process for RPL19P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL19P6 Gene

Drugs & Compounds for RPL19P6 Gene

No Compound Related Data Available

Transcripts for RPL19P6 Gene

mRNA/cDNA for RPL19P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL19P6 Gene

No ASD Table

Relevant External Links for RPL19P6 Gene

GeneLoc Exon Structure for
RPL19P6
ECgene alternative splicing isoforms for
RPL19P6

Expression for RPL19P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL19P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPL19P6 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPL19P6 Gene:

RPL19P6
genes like me logo Genes that share expression patterns with RPL19P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL19P6 Gene

Orthologs for RPL19P6 Gene

Evolution for RPL19P6 Gene

ENSEMBL:
Gene Tree for RPL19P6 (if available)
TreeFam:
Gene Tree for RPL19P6 (if available)

No data available for Orthologs for RPL19P6 Gene

Paralogs for RPL19P6 Gene

No data available for Paralogs for RPL19P6 Gene

Variants for RPL19P6 Gene

Additional Variant Information for RPL19P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL19P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL19P6 Gene

Disorders for RPL19P6 Gene

Additional Disease Information for RPL19P6

Genetic Association Database
(GAD)

No disorders were found for RPL19P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL19P6 Gene

Publications for RPL19P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. New loci associated with kidney function and chronic kidney disease. (PMID: 20383146) Köttgen A … Fox CS (Nature genetics 2010) 44 58

Products for RPL19P6 Gene

Sources for RPL19P6 Gene

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