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Aliases for RPL18P9 Gene

Aliases for RPL18P9 Gene

  • Ribosomal Protein L18 Pseudogene 9 2 3
  • RPL18_3_1196 3

External Ids for RPL18P9 Gene

Previous GeneCards Identifiers for RPL18P9 Gene

  • GC12M004219

Summaries for RPL18P9 Gene

GeneCards Summary for RPL18P9 Gene

RPL18P9 (Ribosomal Protein L18 Pseudogene 9) is a Pseudogene.

Additional gene information for RPL18P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18P9 Gene

Genomics for RPL18P9 Gene

GeneHancer (GH) Regulatory Elements for RPL18P9 Gene

Promoters and enhancers for RPL18P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J004115 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.2 2228 4.3 SP1 ZNF687 MAFK RELA CREM MLLT1 ZBED1 IKZF1 ZBTB33 BACH1 ENSG00000242444 GC12P006224 HSPA8P5 CCND2 GC12M004119 RPL18P9
GH12J004133 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -15.6 -15568 4.3 SP1 ZNF687 RELA CREM MLLT1 EGR1 ZBED1 IKZF1 ZBTB33 BACH1 HSPA8P5 PARP11 C12orf4 GC12P006210 RPL18P9
GH12J004140 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 -22.5 -22477 3.6 ZNF384 ZNF687 MAFK RELA PRDM1 MLLT1 IKZF1 RFX1 BACH1 IKZF2 HSPA8P5 PARP11 CRACR2A CCND2 C12orf4 GC12P006210 RPL18P9
GH12J004116 Enhancer 0.6 FANTOM5 dbSUPER 0.7 +4.8 4765 0.1 PKNOX1 SMARCA5 CCND2 ENSG00000242444 RPL18P9 HSPA8P5
GH12J004112 Enhancer 0.9 Ensembl ENCODE 0.4 +6.8 6841 1.3 ZNF687 RELA CREM ZBED1 IKZF1 IKZF2 ZNF143 ZNF24 CBFB DPF2 CCND2 CCND2-AS1 ENSG00000242444 RPL18P9 HSPA8P5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL18P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL18P9 Gene

Genomic Locations for RPL18P9 Gene
chr12:4,109,496-4,119,955
(GRCh38/hg38)
Size:
10,460 bases
Orientation:
Minus strand
chr12:4,218,662-4,229,121
(GRCh37/hg19)
Size:
10,460 bases
Orientation:
Minus strand

Genomic View for RPL18P9 Gene

Genes around RPL18P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18P9 Gene

Proteins for RPL18P9 Gene

Post-translational modifications for RPL18P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18P9 Gene

Domains & Families for RPL18P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18P9 Gene

Function for RPL18P9 Gene

Phenotypes From GWAS Catalog for RPL18P9 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18P9 Gene

Localization for RPL18P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18P9 Gene

Pathways & Interactions for RPL18P9 Gene

PathCards logo

SuperPathways for RPL18P9 Gene

No Data Available

Interacting Proteins for RPL18P9 Gene

Gene Ontology (GO) - Biological Process for RPL18P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18P9 Gene

Drugs & Compounds for RPL18P9 Gene

No Compound Related Data Available

Transcripts for RPL18P9 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18P9 Gene

No ASD Table

Relevant External Links for RPL18P9 Gene

GeneLoc Exon Structure for
RPL18P9
ECgene alternative splicing isoforms for
RPL18P9

No data available for mRNA/cDNA for RPL18P9 Gene

Expression for RPL18P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL18P9 Gene:

RPL18P9
genes like me logo Genes that share expression patterns with RPL18P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18P9 Gene

Orthologs for RPL18P9 Gene

No data available for Orthologs and Evolution for RPL18P9 Gene

Paralogs for RPL18P9 Gene

No data available for Paralogs for RPL18P9 Gene

Variants for RPL18P9 Gene

Additional Variant Information for RPL18P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18P9 Gene

Disorders for RPL18P9 Gene

Additional Disease Information for RPL18P9

Genetic Association Database
(GAD)

No disorders were found for RPL18P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL18P9 Gene

Publications for RPL18P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association study of hematological and biochemical traits in a Japanese population. (PMID: 20139978) Kamatani Y … Kamatani N (Nature genetics 2010) 45 58

Products for RPL18P9 Gene

Sources for RPL18P9 Gene

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