Aliases for RPL18P2 Gene

Aliases for RPL18P2 Gene

  • Ribosomal Protein L18 Pseudogene 2 2 3
  • Ribosomal Protein L18 (RPL18) Pseudogene 5
  • RPL18_1_137 3
  • AL513480.1 5

External Ids for RPL18P2 Gene

Previous GeneCards Identifiers for RPL18P2 Gene

  • GC01P180566
  • GC01P182298
  • GC01P182299
  • GC01P182303
  • GC01P182307

Summaries for RPL18P2 Gene

GeneCards Summary for RPL18P2 Gene

RPL18P2 (Ribosomal Protein L18 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL18P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL18P2 Gene

Genomics for RPL18P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL18P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J182329 Enhancer 0.6 Ensembl 600.7 +1.4 1443 0.6 ZNF174 DPF2 SOX6 ZNF561 ZNF766 NCOR1 NFIC ZNF384 NFIB FEZF1 RPL18P2 lnc-RGSL1-5 GLUL DHX9 EIF1P3 ZNF648
GH01J182288 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -37.5 -37524 5.3 HNRNPL GATAD2A REST TFE3 SOX13 IKZF1 RCOR2 ZNF7 JUND MTA2 DHX9 HMGN1P4 LAMC1 RNU6-152P RPL18P2 GLUL piR-31937-011 LINC01344 ZNF648
GH01J182299 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 11.8 -27.5 -27466 3.7 ARHGAP35 GATAD2A ATF7 ZNF512 RFX1 LEF1 SOX13 IKZF1 NFKBIZ ZNF692 DHX9 HMGN1P4 LAMC1 GLUL RNU6-152P RPL18P2 EIF1P3 LINC01344 piR-31937-011 ZNF648
GH01J182255 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -69.3 -69257 8 ZNF512 LEF1 IKZF1 ZNF692 JUND PHF21A ZIC2 PKNOX1 MTA1 REST DHX9 GLUL LAMC1-AS1 TEDDM1 RNU6-152P RPL18P2 RNASEL lnc-RGSL1-6 piR-57965-002 LINC01344
GH01J182396 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.3 +68.7 68714 1.4 CTCF PRDM10 ZNF512 IKZF1 ZNF174 JUND FOXA1 ZNF143 REST RAD21 DHX9 HMGN1P4 RPL18P2 RNU6-152P GLUL TEDDM1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL18P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL18P2 Gene

Genomic Locations for RPL18P2 Gene
chr1:182,328,458-182,329,058
(GRCh38/hg38)
Size:
601 bases
Orientation:
Plus strand
chr1:182,297,593-182,298,193
(GRCh37/hg19)
Size:
601 bases
Orientation:
Plus strand

Genomic View for RPL18P2 Gene

Genes around RPL18P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18P2 Gene

Proteins for RPL18P2 Gene

Post-translational modifications for RPL18P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18P2 Gene

Domains & Families for RPL18P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL18P2 Gene

Function for RPL18P2 Gene

Phenotypes From GWAS Catalog for RPL18P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18P2 Gene

Localization for RPL18P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18P2 Gene

Pathways & Interactions for RPL18P2 Gene

PathCards logo

SuperPathways for RPL18P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL18P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL18P2 Gene

Drugs & Compounds for RPL18P2 Gene

No Compound Related Data Available

Transcripts for RPL18P2 Gene

mRNA/cDNA for RPL18P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18P2 Gene

No ASD Table

Relevant External Links for RPL18P2 Gene

GeneLoc Exon Structure for
RPL18P2

Expression for RPL18P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL18P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPL18P2 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with RPL18P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18P2 Gene

Orthologs for RPL18P2 Gene

Evolution for RPL18P2 Gene

ENSEMBL:
Gene Tree for RPL18P2 (if available)
TreeFam:
Gene Tree for RPL18P2 (if available)

No data available for Orthologs for RPL18P2 Gene

Paralogs for RPL18P2 Gene

No data available for Paralogs for RPL18P2 Gene

Variants for RPL18P2 Gene

Additional Variant Information for RPL18P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18P2 Gene

Disorders for RPL18P2 Gene

No disorders were found for RPL18P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18P2 Gene

Publications for RPL18P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL18P2 Gene

Products for RPL18P2 Gene

Sources for RPL18P2 Gene