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RPL18P2 Gene(Pseudogene)

Ribosomal Protein L18 Pseudogene 2

GCID:
GC01P182328
GIFtS:
10
Genes Participants
UDN Logo

Aliases for RPL18P2 Gene

Aliases for RPL18P2 Gene

  • Ribosomal Protein L18 Pseudogene 2 2 3
  • RPL18_1_137 3
  • AL513480.1 5

External Ids for RPL18P2 Gene

Previous GeneCards Identifiers for RPL18P2 Gene

  • GC01P180566
  • GC01P182298
  • GC01P182299
  • GC01P182303
  • GC01P182307

Summaries for RPL18P2 Gene

GeneCards Summary for RPL18P2 Gene

RPL18P2 (Ribosomal Protein L18 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL18P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL18P2 Gene

Genomics for RPL18P2 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL18P2 Gene

Promoters and enhancers for RPL18P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01I182299 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -27.5 -27466 3.7 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B YBX1 FEZF1 DMAP1 DHX9 HMGN1P4 LAMC1 GLUL RPL18P2 RNU6-152P EIF1P3 LINC01344 YPEL5P1
GH01I182288 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -37.5 -37524 5.3 HDGF PKNOX1 ATF1 FOXA2 MLX ARID4B FEZF1 ZNF48 ETS1 YY1 DHX9 LAMC1 RNU6-152P RPL18P2 GLUL HMGN1P4 LINC01344 YPEL5P1
GH01I182142 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -181.8 -181811 7.8 PKNOX1 FOXA2 ARNT YY1 ZNF143 DEK REST ZNF592 SMARCA4 GLIS1 GLUL TEDDM1 RNU6-152P RPL18P2 RGS16 RGSL1 RNASEL ENSG00000232309 GC01M182183 LINC01344
GH01I182257 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -69.2 -69215 3.3 PKNOX1 ATF1 NCOA2 ZNF280A TCF12 POLR2B ZNF766 CBX5 GATA2 ATF7 DHX9 GLUL LAMC1-AS1 TEDDM1 RNU6-152P RPL18P2 RNASEL LINC01344 YPEL5P1
GH01I182173 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -153.6 -153593 2.5 ELF3 PKNOX1 FOXA2 INSM2 KLF17 MZF1 FEZF1 GLI4 ZNF2 ZNF366 GLUL TEDDM1 RNU6-152P RPL18P2 RNASEL GC01M182183 ENSG00000232309 LINC01344
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL18P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL18P2 Gene

Genomic Locations for RPL18P2 Gene
chr1:182,328,458-182,329,058
(GRCh38/hg38)
Size:
601 bases
Orientation:
Plus strand
chr1:182,297,593-182,298,193
(GRCh37/hg19)

Genomic View for RPL18P2 Gene

Genes around RPL18P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL18P2 Gene

Proteins for RPL18P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL18P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18P2 Gene

Domains & Families for RPL18P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL18P2 Gene

Function for RPL18P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPL18P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18P2 Gene

Localization for RPL18P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18P2 Gene

Pathways & Interactions for RPL18P2 Gene

SuperPathways for RPL18P2 Gene

PathCards logo More details on SuperPathways for RPL18P2
No Data Available

Interacting Proteins for RPL18P2 Gene

Gene Ontology (GO) - Biological Process for RPL18P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL18P2 Gene

Drugs & Compounds for RPL18P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL18P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL18P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18P2 Gene

No ASD Table

Relevant External Links for RPL18P2 Gene

GeneLoc Exon Structure for
RPL18P2
ECgene alternative splicing isoforms for
RPL18P2

Expression for RPL18P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL18P2 Gene

mRNA expression in normal human tissues for RPL18P2 Gene
mRNA expression by GTEx for RPL18P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPL18P2 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL18P2 Gene:

RPL18P2
genes like me logo Genes that share expression patterns with RPL18P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18P2 Gene

Orthologs for RPL18P2 Gene

Evolution for RPL18P2 Gene

ENSEMBL:
Gene Tree for RPL18P2 (if available)
TreeFam:
Gene Tree for RPL18P2 (if available)

No data available for Orthologs for RPL18P2 Gene

Paralogs for RPL18P2 Gene

No data available for Paralogs for RPL18P2 Gene

Variants for RPL18P2 Gene

Additional Variant Information for RPL18P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18P2 Gene

Disorders for RPL18P2 Gene

No disorders were found for RPL18P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18P2 Gene

Publications for RPL18P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL18P2 Gene

Sources for RPL18P2 Gene

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