Aliases for RPL18AP12 Gene

Aliases for RPL18AP12 Gene

  • Ribosomal Protein L18a Pseudogene 12 2 3
  • Ribosomal Protein L18a (RPL18A) Pseudogene 5
  • RPL18A_7_1543 3
  • AC244093.2 5

External Ids for RPL18AP12 Gene

Previous GeneCards Identifiers for RPL18AP12 Gene

  • GC17U901160
  • GC17P035520

Summaries for RPL18AP12 Gene

GeneCards Summary for RPL18AP12 Gene

RPL18AP12 (Ribosomal Protein L18a Pseudogene 12) is a Pseudogene.

Additional gene information for RPL18AP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL18AP12 Gene

Genomics for RPL18AP12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL18AP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J037161 Enhancer 0.4 Ensembl ENCODE 600.7 -1.2 -1189 0.8 NFIC RPL18AP12 lnc-AATF-4 HMGB1P24 lnc-SYNRG-4 C17orf78 AATF ACACA
GH17J037163 Enhancer 0.2 FANTOM5 600.7 +0.6 623 0 RPL18AP12 lnc-AATF-4 ACACA lnc-AATF-5 C17orf78 AATF
GH17J037162 Enhancer 0.2 FANTOM5 600.7 +0.2 207 0 RPL18AP12 lnc-AATF-4 lnc-AATF-5 C17orf78 AATF ACACA
GH17J037146 Enhancer 0.8 ENCODE 0.4 -15.0 -15019 1.7 GATAD2A SOX13 RCOR2 POLR2A SP1 CEBPA FOXK2 TCF7 ZNF524 FOXA1 HMGB1P24 lnc-SYNRG-4 RPL18AP12 AATF C17orf78 ACACA
GH17J037160 Enhancer 0.3 Ensembl 0.7 -2.1 -2079 0.6 ZNF316 C17orf78 RPL18AP12 HMGB1P24 lnc-SYNRG-4 AATF ACACA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL18AP12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL18AP12 Gene

Genomic Locations for RPL18AP12 Gene
chr17:37,162,580-37,163,196
(GRCh38/hg38)
Size:
617 bases
Orientation:
Plus strand
chr17:35,519,495-35,520,107
(GRCh37/hg19)
Size:
613 bases
Orientation:
Plus strand

Genomic View for RPL18AP12 Gene

Genes around RPL18AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL18AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL18AP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL18AP12 Gene

Proteins for RPL18AP12 Gene

Post-translational modifications for RPL18AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL18AP12 Gene

Domains & Families for RPL18AP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL18AP12 Gene

Function for RPL18AP12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL18AP12 Gene

Localization for RPL18AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL18AP12 Gene

Pathways & Interactions for RPL18AP12 Gene

PathCards logo

SuperPathways for RPL18AP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL18AP12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL18AP12 Gene

Drugs & Compounds for RPL18AP12 Gene

No Compound Related Data Available

Transcripts for RPL18AP12 Gene

mRNA/cDNA for RPL18AP12 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL18AP12 Gene

No ASD Table

Relevant External Links for RPL18AP12 Gene

GeneLoc Exon Structure for
RPL18AP12

Expression for RPL18AP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL18AP12 Gene

mRNA expression in normal human tissues for RPL18AP12 Gene

mRNA differential expression in normal tissues according to GTEx for RPL18AP12 Gene

This gene is overexpressed in Prostate (x5.5) and Esophagus - Mucosa (x4.3).
genes like me logo Genes that share expression patterns with RPL18AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL18AP12 Gene

Orthologs for RPL18AP12 Gene

Evolution for RPL18AP12 Gene

ENSEMBL:
Gene Tree for RPL18AP12 (if available)
TreeFam:
Gene Tree for RPL18AP12 (if available)

No data available for Orthologs for RPL18AP12 Gene

Paralogs for RPL18AP12 Gene

No data available for Paralogs for RPL18AP12 Gene

Variants for RPL18AP12 Gene

Additional Variant Information for RPL18AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL18AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL18AP12 Gene

Disorders for RPL18AP12 Gene

No disorders were found for RPL18AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL18AP12 Gene

Publications for RPL18AP12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL18AP12 Gene

Products for RPL18AP12 Gene

Sources for RPL18AP12 Gene