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Aliases for RPL17P6 Gene

Aliases for RPL17P6 Gene

  • Ribosomal Protein L17 Pseudogene 6 2 3
  • RPL17_1_64 3
  • AC113935.1 5

External Ids for RPL17P6 Gene

Previous GeneCards Identifiers for RPL17P6 Gene

  • GC01P077366
  • GC01P077596

Summaries for RPL17P6 Gene

GeneCards Summary for RPL17P6 Gene

RPL17P6 (Ribosomal Protein L17 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL17P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P6 Gene

Genomics for RPL17P6 Gene

GeneHancer (GH) Regulatory Elements for RPL17P6 Gene

Promoters and enhancers for RPL17P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I077680 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 33.4 +553.8 553823 4 HDGF PKNOX1 CLOCK SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZZZ3 FUBP1 RPL17P6 ENSG00000273338 NEXN GIPC2 AK5 DNAJB4 RN7SL370P
GH01I076336 Enhancer 0.7 ENCODE 9.7 -791.8 -791759 1.5 ZBTB6 MZF1 ZIC2 ZFHX2 POLR2A ZBTB48 PATZ1 PRDM10 RCOR1 CHD2 RPL17P6 LOC100418965 GC01M076190 ST6GALNAC3
GH01I077542 Enhancer 0.5 dbSUPER 10.7 +414.3 414315 1.7 GATA3 ZNF140 CEBPB PRDM10 ZNF24 FOS ZZZ3 FUBP1 AK5 RPL17P6 GC01P077577 GC01P077502
GH01I077126 Enhancer 0.6 Ensembl 0.8 -3.0 -2973 0.2 SCRT1 CTCF TRIM22 SCRT2 ZNF512 TARDBP NBN MLLT1 PRDM1 RPL17P6 ENSG00000230498 GC01M077065 PIGK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL17P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P6 Gene

Genomic Locations for RPL17P6 Gene
chr1:77,129,074-77,129,703
(GRCh38/hg38)
Size:
630 bases
Orientation:
Plus strand
chr1:77,594,759-77,595,388
(GRCh37/hg19)

Genomic View for RPL17P6 Gene

Genes around RPL17P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P6 Gene

Proteins for RPL17P6 Gene

Post-translational modifications for RPL17P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P6 Gene

Domains & Families for RPL17P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P6 Gene

Function for RPL17P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P6 Gene

Localization for RPL17P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P6 Gene

Pathways & Interactions for RPL17P6 Gene

SuperPathways for RPL17P6 Gene

No Data Available

Interacting Proteins for RPL17P6 Gene

Gene Ontology (GO) - Biological Process for RPL17P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P6 Gene

Drugs & Compounds for RPL17P6 Gene

No Compound Related Data Available

Transcripts for RPL17P6 Gene

mRNA/cDNA for RPL17P6 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P6 Gene

No ASD Table

Relevant External Links for RPL17P6 Gene

GeneLoc Exon Structure for
RPL17P6
ECgene alternative splicing isoforms for
RPL17P6

Expression for RPL17P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P6 Gene:

RPL17P6
genes like me logo Genes that share expression patterns with RPL17P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P6 Gene

Orthologs for RPL17P6 Gene

Evolution for RPL17P6 Gene

ENSEMBL:
Gene Tree for RPL17P6 (if available)
TreeFam:
Gene Tree for RPL17P6 (if available)

No data available for Orthologs for RPL17P6 Gene

Paralogs for RPL17P6 Gene

No data available for Paralogs for RPL17P6 Gene

Variants for RPL17P6 Gene

Additional Variant Information for RPL17P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P6 Gene

Disorders for RPL17P6 Gene

Additional Disease Information for RPL17P6

Genetic Association Database
(GAD)

No disorders were found for RPL17P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P6 Gene

Publications for RPL17P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPL17P6 Gene

Sources for RPL17P6 Gene

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