RPL17P44 Gene (Pseudogene)

Ribosomal Protein L17 Pseudogene 44

GC18P062415
GIFtS:
5
See more...

Aliases for RPL17P44 Gene

Aliases for RPL17P44 Gene

  • Ribosomal Protein L17 Pseudogene 44 2 3 5
  • RPL17_28_1610 3
  • RPL17P44 5

External Ids for RPL17P44 Gene

Previous GeneCards Identifiers for RPL17P44 Gene

  • GC18P058234
  • GC18P060084

Summaries for RPL17P44 Gene

GeneCards Summary for RPL17P44 Gene

RPL17P44 (Ribosomal Protein L17 Pseudogene 44) is a Pseudogene.

Additional gene information for RPL17P44 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL17P44 Gene

Genomics for RPL17P44 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPL17P44 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J062416 Enhancer 0.2 Ensembl 250.7 +1.5 1544 0.8 ENSG00000267487 RPL17P44 lnc-TNFRSF11A-1 lnc-TNFRSF11A-2 HSALNG0121977 TNFRSF11A ZCCHC2 NONHSAG024039.2
GH18J062412 Enhancer 0.3 ENCODE 0.7 -2.4 -2409 1.7 ZNF335 piR-32314-012 PIGN RPL17P44 HSALNG0121977 TNFRSF11A ZCCHC2 NONHSAG024039.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P44 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL17P44 Gene

Latest Assembly
chr18:62,415,657-62,416,257
(GRCh38/hg38)
Size:
601 bases
Orientation:
Plus strand

Previous Assembly
chr18:60,082,890-60,083,490
(GRCh37/hg19 by Entrez Gene)
Size:
601 bases
Orientation:
Plus strand

chr18:60,082,911-60,083,460
(GRCh37/hg19 by Ensembl)
Size:
550 bases
Orientation:
Plus strand

Genomic View for RPL17P44 Gene

Genes around RPL17P44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P44 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL17P44 Gene

Proteins for RPL17P44 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for RPL17P44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P44 Gene

Domains & Families for RPL17P44 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL17P44 Gene

Function for RPL17P44 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for RPL17P44 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P44 Gene

Localization for RPL17P44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P44 Gene

Pathways & Interactions for RPL17P44 Gene

PathCards logo

SuperPathways for RPL17P44 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL17P44 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL17P44 Gene

Drugs & Compounds for RPL17P44 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for RPL17P44 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
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mRNA/cDNA for RPL17P44 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P44 Gene

No ASD Table

Relevant External Links for RPL17P44 Gene

GeneLoc Exon Structure for
RPL17P44

Expression for RPL17P44 Gene

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  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P44 Gene

mRNA expression in normal human tissues for RPL17P44 Gene
mRNA expression by GTEx for RPL17P44 Gene
genes like me logo Genes that share expression patterns with RPL17P44: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P44 Gene

Orthologs for RPL17P44 Gene

Evolution for RPL17P44 Gene

ENSEMBL:
Gene Tree for RPL17P44 (if available)
TreeFam:
Gene Tree for RPL17P44 (if available)

No data available for Orthologs for RPL17P44 Gene

Paralogs for RPL17P44 Gene

No data available for Paralogs for RPL17P44 Gene

Variants for RPL17P44 Gene

Additional Variant Information for RPL17P44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P44 Gene

Disorders for RPL17P44 Gene

No disorders were found for RPL17P44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P44 Gene

Publications for RPL17P44 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPL17P44 gene in Mastermind

Products for RPL17P44 Gene

Sources for RPL17P44 Gene