Aliases for RPL17P42 Gene

Aliases for RPL17P42 Gene

  • Ribosomal Protein L17 Pseudogene 42 2 3
  • RPL17_25_1540 3

External Ids for RPL17P42 Gene

Previous GeneCards Identifiers for RPL17P42 Gene

  • GC17U901143
  • GC17P034047
  • GC17P030232

Summaries for RPL17P42 Gene

GeneCards Summary for RPL17P42 Gene

RPL17P42 (Ribosomal Protein L17 Pseudogene 42) is a Pseudogene.

Additional gene information for RPL17P42 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL17P42 Gene

Genomics for RPL17P42 Gene

GeneHancer (GH) Regulatory Elements for RPL17P42 Gene

Promoters and enhancers for RPL17P42 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J035718 Enhancer 0.5 Ensembl ENCODE 500.7 -1.6 -1626 0.2 PRDM6 ZSCAN4 RPL17P42 lnc-RASL10B-1 C17orf50 MMP28 AP2B1 TAF15
GH17J035725 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +6.6 6626 2.5 ZIC2 ZNF623 ZNF423 TRIM28 OSR2 NFIC ZBTB17 ZNF263 ZNF184 POLR2A AP2B1 ZNF830 C17orf50 MMP28 LIG3 GAS2L2 RASL10B RPL17P42 TAF15
GH17J035730 Promoter 0.3 Ensembl 0.4 +11.0 10994 0.2 RASL10B RPL17P42 TAF15
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P42 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P42 Gene

Genomic Locations for RPL17P42 Gene
chr17:35,719,907-35,720,426
(GRCh38/hg38)
Size:
520 bases
Orientation:
Plus strand
chr17:34,046,907-34,047,461
(GRCh37/hg19)
Size:
555 bases
Orientation:
Plus strand

Genomic View for RPL17P42 Gene

Genes around RPL17P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P42 Gene

Proteins for RPL17P42 Gene

Post-translational modifications for RPL17P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P42 Gene

Domains & Families for RPL17P42 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL17P42 Gene

Function for RPL17P42 Gene

Phenotypes From GWAS Catalog for RPL17P42 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P42 Gene

Localization for RPL17P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P42 Gene

Pathways & Interactions for RPL17P42 Gene

PathCards logo

SuperPathways for RPL17P42 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL17P42 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL17P42 Gene

Drugs & Compounds for RPL17P42 Gene

No Compound Related Data Available

Transcripts for RPL17P42 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P42 Gene

No ASD Table

Relevant External Links for RPL17P42 Gene

GeneLoc Exon Structure for
RPL17P42

No data available for mRNA/cDNA for RPL17P42 Gene

Expression for RPL17P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P42 Gene

genes like me logo Genes that share expression patterns with RPL17P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P42 Gene

Orthologs for RPL17P42 Gene

No data available for Orthologs and Evolution for RPL17P42 Gene

Paralogs for RPL17P42 Gene

No data available for Paralogs for RPL17P42 Gene

Variants for RPL17P42 Gene

Additional Variant Information for RPL17P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P42 Gene

Disorders for RPL17P42 Gene

No disorders were found for RPL17P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P42 Gene

Publications for RPL17P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL17P42 Gene

Products for RPL17P42 Gene

Sources for RPL17P42 Gene