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Aliases for RPL17P33 Gene

Aliases for RPL17P33 Gene

  • Ribosomal Protein L17 Pseudogene 33 2 3 5
  • RPL17_19_888 3

External Ids for RPL17P33 Gene

Previous GeneCards Identifiers for RPL17P33 Gene

  • GC08P029546
  • GC08P028034

Summaries for RPL17P33 Gene

GeneCards Summary for RPL17P33 Gene

RPL17P33 (Ribosomal Protein L17 Pseudogene 33) is a Pseudogene.

Additional gene information for RPL17P33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P33 Gene

Genomics for RPL17P33 Gene

GeneHancer (GH) Regulatory Elements for RPL17P33 Gene

Promoters and enhancers for RPL17P33 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J029633 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.1 6145 10.4 CTCF ZNF687 ELF1 RELA CREM MLLT1 IKZF1 ZBTB33 BACH1 IKZF2 DUSP4 RNU6-1218P KIF13B RPL17P33 LINC00589
GH08J029653 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +23.6 23591 4.6 NCOA3 MAFK CREM FOSL2 CREB1 ZBTB33 REST CTBP1 CEBPB CHD2 DUSP4 KIF13B RPL17P33 LINC00589
GH08J029663 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 +32.8 32816 2.9 SP1 ZSCAN21 JUND ELF1 SP7 RELA CREM PRDM1 MLLT1 SMARCA4 DUSP4 KIF13B RPL17P33 LINC00589
GH08J029673 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.1 43145 2.8 SP7 ZEB2 ZNF639 ZNF629 ZNF692 CEBPB CHD2 JUN SP1 RCOR1 DUSP4 RPL17P33 LINC00589
GH08J029645 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +13.8 13845 1 ZNF366 RNU6-1218P RPL17P33 LINC00589
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P33 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P33 Gene

Genomic Locations for RPL17P33 Gene
chr8:29,632,056-29,632,683
(GRCh38/hg38)
Size:
628 bases
Orientation:
Plus strand
chr8:29,489,572-29,490,199
(GRCh37/hg19)
Size:
628 bases
Orientation:
Plus strand

Genomic View for RPL17P33 Gene

Genes around RPL17P33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P33 Gene

Proteins for RPL17P33 Gene

Post-translational modifications for RPL17P33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P33 Gene

Domains & Families for RPL17P33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P33 Gene

Function for RPL17P33 Gene

Phenotypes From GWAS Catalog for RPL17P33 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P33 Gene

Localization for RPL17P33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P33 Gene

Pathways & Interactions for RPL17P33 Gene

PathCards logo

SuperPathways for RPL17P33 Gene

No Data Available

Interacting Proteins for RPL17P33 Gene

Gene Ontology (GO) - Biological Process for RPL17P33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P33 Gene

Drugs & Compounds for RPL17P33 Gene

No Compound Related Data Available

Transcripts for RPL17P33 Gene

mRNA/cDNA for RPL17P33 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P33 Gene

No ASD Table

Relevant External Links for RPL17P33 Gene

GeneLoc Exon Structure for
RPL17P33
ECgene alternative splicing isoforms for
RPL17P33

Expression for RPL17P33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P33 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P33 Gene:

RPL17P33
genes like me logo Genes that share expression patterns with RPL17P33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P33 Gene

Orthologs for RPL17P33 Gene

Evolution for RPL17P33 Gene

ENSEMBL:
Gene Tree for RPL17P33 (if available)
TreeFam:
Gene Tree for RPL17P33 (if available)

No data available for Orthologs for RPL17P33 Gene

Paralogs for RPL17P33 Gene

No data available for Paralogs for RPL17P33 Gene

Variants for RPL17P33 Gene

Additional Variant Information for RPL17P33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P33 Gene

Disorders for RPL17P33 Gene

No disorders were found for RPL17P33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P33 Gene

Publications for RPL17P33 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL17P33 Gene

Sources for RPL17P33 Gene

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