Aliases for RPL17P3 Gene

Aliases for RPL17P3 Gene

  • Ribosomal Protein L17 Pseudogene 3 2 3 5

External Ids for RPL17P3 Gene

Previous GeneCards Identifiers for RPL17P3 Gene

  • GC14U900042
  • GC14M079457
  • GC14M080537
  • GC14M081467

Summaries for RPL17P3 Gene

GeneCards Summary for RPL17P3 Gene

RPL17P3 (Ribosomal Protein L17 Pseudogene 3) is a Pseudogene.

Additional gene information for RPL17P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL17P3 Gene

Genomics for RPL17P3 Gene

GeneHancer (GH) Regulatory Elements for RPL17P3 Gene

Promoters and enhancers for RPL17P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J080987 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +14.4 14376 0.9 CTCF JUND TRIM28 REST RAD21 TRIM22 SMC3 WT1 ZBTB17 ZNF76 CEP128 NMNAT1P1 lnc-NRXN3-4 RPL17P3 TSHR
GH14J080996 Enhancer 0.9 FANTOM5 Ensembl 0.4 +5.1 5116 1 CTCF FOS REST RAD21 TRIM22 SMC3 RBM25 CEBPG FOSL2 CEBPB GTF2A1 CEP128 SNORA79 NMNAT1P1 RPL17P3 lnc-NRXN3-4 TSHR
GH14J080992 Enhancer 0.6 FANTOM5 0.4 +9.3 9282 0.3 NR2F2 ZBTB33 JUND RXRA HNF4A RAD21 HNF4G ATF3 SP1 GABPA TSHR CEP128 SNORA79 GTF2A1 RPL17P3 lnc-NRXN3-4
GH14J080988 Enhancer 0.4 Ensembl dbSUPER 0.4 +13.1 13116 0.2 FOS CEP128 lnc-NRXN3-4 RPL17P3 TSHR
GH14J080985 Enhancer 0.3 Ensembl dbSUPER 0.4 +16.2 16216 1.2 CEP128 TSHR BHLHB9P1 lnc-NRXN3-4 RPL17P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P3 Gene

Genomic Locations for RPL17P3 Gene
chr14:81,001,134-81,001,817
(GRCh38/hg38)
Size:
684 bases
Orientation:
Minus strand
chr14:81,467,478-81,468,161
(GRCh37/hg19)
Size:
684 bases
Orientation:
Minus strand

Genomic View for RPL17P3 Gene

Genes around RPL17P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P3 Gene

Proteins for RPL17P3 Gene

Post-translational modifications for RPL17P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P3 Gene

Domains & Families for RPL17P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL17P3 Gene

Function for RPL17P3 Gene

Phenotypes From GWAS Catalog for RPL17P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P3 Gene

Localization for RPL17P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P3 Gene

Pathways & Interactions for RPL17P3 Gene

PathCards logo

SuperPathways for RPL17P3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL17P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL17P3 Gene

Drugs & Compounds for RPL17P3 Gene

No Compound Related Data Available

Transcripts for RPL17P3 Gene

mRNA/cDNA for RPL17P3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P3 Gene

No ASD Table

Relevant External Links for RPL17P3 Gene

GeneLoc Exon Structure for
RPL17P3

Expression for RPL17P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPL17P3 Gene

This gene is overexpressed in Thyroid (x42.7), Brain - Caudate (basal ganglia) (x5.3), and Brain - Nucleus accumbens (basal ganglia) (x5.0).
genes like me logo Genes that share expression patterns with RPL17P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P3 Gene

Orthologs for RPL17P3 Gene

Evolution for RPL17P3 Gene

ENSEMBL:
Gene Tree for RPL17P3 (if available)
TreeFam:
Gene Tree for RPL17P3 (if available)

No data available for Orthologs for RPL17P3 Gene

Paralogs for RPL17P3 Gene

No data available for Paralogs for RPL17P3 Gene

Variants for RPL17P3 Gene

Additional Variant Information for RPL17P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P3 Gene

Disorders for RPL17P3 Gene

No disorders were found for RPL17P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P3 Gene

Publications for RPL17P3 Gene

No publications were found for RPL17P3 Gene.

Products for RPL17P3 Gene

Sources for RPL17P3 Gene