Aliases for RPL17P26 Gene

Aliases for RPL17P26 Gene

  • Ribosomal Protein L17 Pseudogene 26 2 3 5
  • RPL17_14_707 3
  • RPL17P26 5

External Ids for RPL17P26 Gene

Previous GeneCards Identifiers for RPL17P26 Gene

  • GC06P056845
  • GC06P056736

Summaries for RPL17P26 Gene

GeneCards Summary for RPL17P26 Gene

RPL17P26 (Ribosomal Protein L17 Pseudogene 26) is a Pseudogene.

Additional gene information for RPL17P26 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL17P26 Gene

Genomics for RPL17P26 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL17P26 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J056871 Enhancer 0.2 Ensembl 600.7 +0.1 130 0.2 RPL17P26 lnc-BEND6-2 piR-41405-051 DST COL21A1
GH06J056849 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -19.7 -19715 4.1 CTCF BACH1 FOXA1 STAT3 ZNF143 REST RAD21 IKZF2 POLR2A TRIM22 DST-AS1 RPL17P26 DST COL21A1
GH06J056859 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -6.1 -6052 10.6 GATAD2A PRDM10 ZNF629 ZNF692 PRDM1 ZSCAN4 CTCF ZNF600 SOX6 CEBPA DST-AS1 BEND6 BAG2 ZNF451-AS1 RPL17P26 DST COL21A1
GH06J056847 Enhancer 0.5 Ensembl dbSUPER 0.4 -23.6 -23570 0.4 WT1 SPI1 DST-AS1 RPL17P26 DST COL21A1
GH06J056846 Enhancer 0.3 Ensembl dbSUPER 0.4 -24.9 -24870 0.6 DST-AS1 RPL17P26 DST COL21A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P26 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL17P26 Gene

Genomic Locations for RPL17P26 Gene
chr6:56,871,171-56,871,783
(GRCh38/hg38)
Size:
613 bases
Orientation:
Plus strand
chr6:56,735,947-56,736,578
(GRCh37/hg19)
Size:
632 bases
Orientation:
Plus strand

Genomic View for RPL17P26 Gene

Genes around RPL17P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P26 Gene

Proteins for RPL17P26 Gene

Post-translational modifications for RPL17P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P26 Gene

Domains & Families for RPL17P26 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL17P26 Gene

Function for RPL17P26 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P26 Gene

Localization for RPL17P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P26 Gene

Pathways & Interactions for RPL17P26 Gene

PathCards logo

SuperPathways for RPL17P26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL17P26 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL17P26 Gene

Drugs & Compounds for RPL17P26 Gene

No Compound Related Data Available

Transcripts for RPL17P26 Gene

mRNA/cDNA for RPL17P26 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P26 Gene

No ASD Table

Relevant External Links for RPL17P26 Gene

GeneLoc Exon Structure for
RPL17P26

Expression for RPL17P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P26 Gene

genes like me logo Genes that share expression patterns with RPL17P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P26 Gene

Orthologs for RPL17P26 Gene

Evolution for RPL17P26 Gene

ENSEMBL:
Gene Tree for RPL17P26 (if available)
TreeFam:
Gene Tree for RPL17P26 (if available)

No data available for Orthologs for RPL17P26 Gene

Paralogs for RPL17P26 Gene

No data available for Paralogs for RPL17P26 Gene

Variants for RPL17P26 Gene

Additional Variant Information for RPL17P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P26 Gene

Disorders for RPL17P26 Gene

No disorders were found for RPL17P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P26 Gene

Publications for RPL17P26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL17P26 Gene

Sources for RPL17P26 Gene